RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 SFT2D3Q587I9 215 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 SPDYAQ5MJ70 313 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 IRAK1BP1Q5VVH5 260 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 ACSM2BQ68CK6 577 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 TCTN3Q6NUS6 607 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 GALNT18Q6P9A2 607 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 SCIMPQ6UWF3 145 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 TRIM42Q8IWZ5 723 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 KBTBD2Q8IY47 623 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 EXD3Q8N9H8 876 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 RAB3IL1Q8TBN0 382 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 MGARPQ8TDB4 240 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 ABHD17AQ96GS6 310 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 IMMP1LQ96LU5 166 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 CCT7Q99832 543 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 WDR77Q9BQA1 342 aaPredicted RBP10.16□□□□□ -0.78
ATG4B-219ENST00000479941 LHPPQ9H008 270 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 RPF2Q9H7B2 306 aaKnown RBP10.16□□□□□ -0.78
ATG4B-219ENST00000479941 NECTIN3Q9NQS3 549 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 GPR83Q9NYM4 423 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 ZDHHC2Q9UIJ5 367 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.16□□□□□ -0.78
ATG4B-219ENST00000479941 FIS1Q9Y3D6 152 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 PCDHGB7Q9Y5F8 929 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 PCSK5Q92824 1860 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 IGHV3-20A0A0C4DH32 117 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 GNG14A0A1W2PPG7 69 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 A0A1W2PR48 441 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 ITM2AO43736 263 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 PCDH7O60245 1069 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 LYPLA1O75608 230 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-219ENST00000479941 SEC24DO94855 1032 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-219ENST00000479941 SERPINA7P05543 415 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 NR2F6P10588 404 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 ITGA3P26006 1051 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 TIA1P31483 386 aaKnown RBP eCLIP10.15□□□□□ -0.78
ATG4B-219ENST00000479941 GSTM5P46439 218 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 SLC1A6P48664 564 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 BST1Q10588 318 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 STX3Q13277 289 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 LY6DQ14210 128 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 MYBPC3Q14896 1274 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 TERF2Q15554 542 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 EXT1Q16394 746 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 ATG16L1Q676U5 607 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 C18orf63Q68DL7 685 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 PLAG1Q6DJT9 500 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 JMJD6Q6NYC1 403 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-219ENST00000479941 PAPD4Q6PIY7 484 aaKnown RBP10.15□□□□□ -0.78
ATG4B-219ENST00000479941 ATG14Q6ZNE5 492 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 Q6ZSR9 355 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 CLNKQ7Z7G1 428 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 FDCSPQ8NFU4 85 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 C9orf43Q8TAL5 461 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-219ENST00000479941 FAM76AQ8TAV0 307 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 M1APQ8TC57 530 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 TWIST2Q8WVJ9 160 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 TM4SF18Q96CE8 201 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 C11orf24Q96F05 449 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-219ENST00000479941 APIPQ96GX9 242 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 SLC25A23Q9BV35 468 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 ALOXE3Q9BYJ1 711 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 ILKAPQ9H0C8 392 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-219ENST00000479941 SLC25A18Q9H1K4 315 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 TUBB1Q9H4B7 451 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 PFDN4Q9NQP4 134 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 VTI1BQ9UEU0 232 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 RAP2CQ9Y3L5 183 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 CCL27Q9Y4X3 112 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 CLDN16Q9Y5I7 305 aa10.15□□□□□ -0.78
ATG4B-219ENST00000479941 PRRC2CQ9Y520 2896 aaKnown RBP10.15□□□□□ -0.79
ATG4B-219ENST00000479941 SCN2AQ99250 2005 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 C1orf226A1L170 272 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 SAGE2PA6NJ88 616 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 A6NL46 340 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 TMEM233B4DJY2 109 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 TGFBR3LH3BV60 316 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 MASP2O00187 686 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 PIP5K1BO14986 540 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 FGF17O60258 216 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 LDB3O75112 727 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 SEC22BO75396 215 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 MYO1DO94832 1006 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 GPR75O95800 540 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 AIFM1O95831 613 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 ALPPP05187 535 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 PRR35P0CG20 571 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 RPL14P50914 215 aaKnown RBP10.14□□□□□ -0.79
ATG4B-219ENST00000479941 RAE1P78406 368 aaKnown RBP10.14□□□□□ -0.79
ATG4B-219ENST00000479941 IGLV3-21P80748 117 aaPredicted RBP10.14□□□□□ -0.79
ATG4B-219ENST00000479941 BTKQ06187 659 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 Q0VFX4 171 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 ELAVL1Q15717 326 aaKnown RBP10.14□□□□□ -0.79
ATG4B-219ENST00000479941 BTBD16Q32M84 506 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 NDUFAF5Q5TEU4 345 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 CES4AQ5XG92 561 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 OR52E8Q6IFG1 317 aa10.14□□□□□ -0.79
ATG4B-219ENST00000479941 DDIASQ8IXT1 998 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms