RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MOSPD2Q8NHP6 518 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 HSD17B8Q92506 261 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 CTSFQ9UBX1 484 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 SCP2D1Q9UJQ7 156 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 SUV39H1O43463 412 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 NIPSNAP2O75323 286 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 GJB3O75712 270 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 APOL3O95236 402 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 OPN1SWP03999 348 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 FABP1P07148 127 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 ODC1P11926 461 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 LCN1P31025 176 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 TSPAN5P62079 268 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 C1DQ13901 141 aaKnown RBP20.29■□□□□ 0.84
SDF4-206ENST00000478938 METAP1DQ6UB28 335 aaPredicted RBP20.29■□□□□ 0.84
SDF4-206ENST00000478938 IMP4Q96G21 291 aaKnown RBP20.29■□□□□ 0.84
SDF4-206ENST00000478938 H7C2Y5 167 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 DAOAP59103 153 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 CAMK1Q14012 370 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 NTRK2Q16620 822 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 C3orf38Q5JPI3 329 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 SPOUT1Q5T280 376 aaKnown RBP20.29■□□□□ 0.84
SDF4-206ENST00000478938 MIB1Q86YT6 1006 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 DNAJB8Q8NHS0 232 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 NANPQ8TBE9 248 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 MAL2Q969L2 176 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 DDOQ99489 341 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 RC3H2Q9HBD1 1191 aaKnown RBP20.29■□□□□ 0.84
SDF4-206ENST00000478938 ZNF70Q9UC06 446 aaPredicted RBP20.29■□□□□ 0.84
SDF4-206ENST00000478938 PLXNA1Q9UIW2 1896 aa20.29■□□□□ 0.84
SDF4-206ENST00000478938 GABRR3A8MPY1 467 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 TMEM229AB2RXF0 380 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 DPM1O60762 260 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 MMP2P08253 660 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 TACR1P25103 407 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 SELENOPP49908 381 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 ZP1P60852 638 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 RPS14P62263 151 aaKnown RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 ZXDBP98169 803 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 DEFA5Q01523 94 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 ADAM15Q13444 863 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 ST3GAL2Q16842 350 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 ATAT1Q5SQI0 421 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 SFRP5Q5T4F7 317 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 WASH2PQ6VEQ5 465 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 PAQR9Q6ZVX9 377 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 B3GALNT2Q8NCR0 500 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 OR5T2Q8NGG2 359 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 LRRC46Q96FV0 321 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 OR2M2Q96R28 347 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 PARK7Q99497 189 aaKnown RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 MED18Q9BUE0 208 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 BEX1Q9HBH7 125 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 MED9Q9NWA0 146 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 ERAP1Q9NZ08 941 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 UXTQ9UBK9 157 aaPredicted RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 ANKRD36A6QL64 1941 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 A0A1B0GVI7 797 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 FAM170BA6NMN3 283 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 RPL9P32969 192 aaKnown RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 SRP9P49458 86 aaKnown RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 KRT74Q7RTS7 529 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 NKAPQ8N5F7 415 aaKnown RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 SLC6A18Q96N87 628 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 MED10Q9BTT4 135 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 METTL17Q9H7H0 456 aaPredicted RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 SARS2Q9NP81 518 aaKnown RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 EMC3Q9P0I2 261 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 FTSJ1Q9UET6 329 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 COMMD10Q9Y6G5 202 aa20.28■□□□□ 0.84
SDF4-206ENST00000478938 TNS1Q9HBL0 1735 aaKnown RBP20.28■□□□□ 0.84
SDF4-206ENST00000478938 J3KTA2 159 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 AIPO00170 330 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 SSNA1O43805 119 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 RPP40O75818 363 aaKnown RBP20.27■□□□□ 0.84
SDF4-206ENST00000478938 OTCP00480 354 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 SULT1A3P0DMM9 295 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 SULT1A4P0DMN0 295 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 HNF1BP35680 557 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 GRIN2CQ14957 1233 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 PTPRNQ16849 979 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 SLC27A1Q6PCB7 646 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 B3GLCTQ6Y288 498 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 FAM167AQ96KS9 214 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 DMRTA2Q96SC8 542 aa20.27■□□□□ 0.84
SDF4-206ENST00000478938 ZAR1LA6NP61 321 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 S100A6P06703 90 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 ADRB1P08588 477 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 ATXN1LP0C7T5 689 aaKnown RBP20.27■□□□□ 0.83
SDF4-206ENST00000478938 HSPA7P48741 367 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 RAB8AP61006 207 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 ZNF621Q6ZSS3 439 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 USP45Q70EL2 814 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 TAC4Q86UU9 113 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 PROKR2Q8NFJ6 384 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 NSMAFQ92636 917 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 PRKAG2Q9UGJ0 569 aa20.27■□□□□ 0.83
SDF4-206ENST00000478938 PURGQ9UJV8 347 aaKnown RBP20.27■□□□□ 0.83
SDF4-206ENST00000478938 A0A1B0GVC2 190 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 C2orf78A6NCI8 922 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms