RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 PIM1P11309 404 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CD1DP15813 335 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 UGT2B7P16662 529 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 GNAZP19086 355 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 ZNF10P21506 573 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 AGXTP21549 392 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 HSD3B2P26439 372 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CD82P27701 267 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CD1CP29017 333 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PRDX3P30048 256 aaKnown RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CCKBRP32239 447 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 MASP1P48740 699 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CCR8P51685 355 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 MAPK10P53779 464 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PRKAA2P54646 552 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 ALDH18A1P54886 795 aaKnown RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 MRPS35P82673 323 aaKnown RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TGM3Q08188 693 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 MGAT2Q10469 447 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TARDBPQ13148 414 aaKnown RBP eCLIP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 NAE1Q13564 534 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 IL11RAQ14626 422 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CASP8Q14790 479 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TGFBIQ15582 683 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TSNQ15631 228 aaKnown RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PDK4Q16654 411 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 NDUFA9Q16795 377 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 C3orf38Q5JPI3 329 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TCTE1Q5JU00 501 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 N4BP2L1Q5TBK1 243 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 SP5Q6BEB4 398 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TTC19Q6DKK2 380 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 NIPAL1Q6NVV3 410 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 METTL2BQ6P1Q9 378 aaKnown RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 SPESP1Q6UW49 350 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 SUSD1Q6UWL2 747 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 LCTLQ6UWM7 567 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CYHR1Q6ZMK1 362 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PPP1R3BQ86XI6 285 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 MYLK4Q86YV6 388 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMEM126BQ8IUX1 230 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CEP97Q8IW35 865 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 KIRREL3Q8IZU9 778 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 LNX2Q8N448 690 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 AFAP1L2Q8N4X5 818 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 C2orf73Q8N5S3 287 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 Q8NA96 180 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TTLQ8NG68 377 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 HMGCLL1Q8TB92 370 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 RDH11Q8TC12 318 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 JPH3Q8WXH2 748 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CCT6BQ92526 530 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 RSC1A1Q92681 617 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 KIAA1143Q96AT1 154 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 REPS1Q96D71 796 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PTCD3Q96EY7 689 aaKnown RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TAAR9Q96RI9 348 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 MAP3K3Q99759 626 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 C17orf62Q9BQA9 187 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 AIF1LQ9BQI0 150 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 NUDT22Q9BRQ3 303 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 EFHD1Q9BUP0 239 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 EFCAB11Q9BUY7 163 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMEM109Q9BVC6 243 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 ACAT2Q9BWD1 397 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TXLNGYQ9BZA5 131 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 ATG10Q9H0Y0 220 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 KLK15Q9H2R5 256 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 POLR1BQ9H9Y6 1135 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PLAC1Q9HBJ0 212 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PFDN4Q9NQP4 134 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TXLNGQ9NUQ3 528 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMEM184CQ9NVA4 438 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 DNAJC11Q9NVH1 559 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 NMRK1Q9NWW6 199 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 SLC39A1Q9NY26 324 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 STOX2Q9P2F5 926 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 GALPQ9UBC7 116 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PISDQ9UG56 409 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CIDEBQ9UHD4 219 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 TAC3Q9UHF0 121 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 POMT2Q9UKY4 750 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PLCL2Q9UPR0 1127 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 ICKQ9UPZ9 632 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 PDE10AQ9Y233 779 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 LOXL2Q9Y4K0 774 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 NEUROG3Q9Y4Z2 214 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 AP1M2Q9Y6Q5 423 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 OTOGLQ3ZCN5 2332 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 MYLKQ15746 1914 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 CABIN1Q9Y6J0 2220 aa4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 EP300Q09472 2414 aaPredicted RBP4.3□□□□□ -1.72
NSMCE4A-208ENST00000477289 KNL1Q8NG31 2342 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 PLXNB3Q9ULL4 1909 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 MN1Q10571 1320 aaPredicted RBP4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 RIF1Q5UIP0 2472 aaKnown RBP4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 MUC3AQ02505 3323 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 LY6G6EA0A0G2JKS1 128 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 A0A1W2PQM1 296 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms