RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 HNRNPH2P55795 449 aaKnown RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 RPS13P62277 151 aaKnown RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 STX4Q12846 297 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 SLAMF1Q13291 335 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 DDX39BQ13838 428 aaKnown RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 GTF2H2Q13888 395 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 MRM1Q6IN84 353 aaKnown RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 GTF2H2CQ6P1K8 395 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 NCCRP1Q6ZVX7 275 aaPredicted RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 GOLGA7Q7Z5G4 137 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 OR4N5Q8IXE1 308 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 ZNF808Q8N4W9 903 aaPredicted RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 TMEM156Q8N614 296 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 L3MBTL4Q8NA19 623 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 ZFP62Q8NB50 900 aaPredicted RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 OR14A16Q8NHC5 309 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 WDR20Q8TBZ3 569 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 SLC2A12Q8TD20 617 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 ZNF721Q8TF20 911 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 SREK1Q8WXA9 508 aaKnown RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 DAZLQ92904 295 aaKnown RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 TMEM125Q96AQ2 219 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 RASL10BQ96S79 203 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 MTERF1Q99551 399 aaKnown RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 SUCOQ9UBS9 1254 aaKnown RBP17.24■□□□□ 0.35
COL7A1-209ENST00000474432 ADGRE2Q9UHX3 823 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 RNF11Q9Y3C5 154 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 ATG4BQ9Y4P1 393 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 CLCA3PQ9Y6N3 262 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 CACNA1CQ13936 2221 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 APCP25054 2843 aa17.24■□□□□ 0.35
COL7A1-209ENST00000474432 CREBBPQ92793 2442 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 WASHC1A8K0Z3 465 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 C17orf105B2RV13 164 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 PRSS44E7EML9 344 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 OR7A17O14581 309 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 PRKRAO75569 313 aaKnown RBP17.23■□□□□ 0.35
COL7A1-209ENST00000474432 ACSL3O95573 720 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 MLYCDO95822 493 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 CPN2P22792 545 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 PHBP35232 272 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 BSGP35613 385 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 SSR4P51571 173 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 GPR85P60893 370 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 SERTAD2Q14140 314 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 CMPK2Q5EBM0 449 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 C18orf63Q68DL7 685 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 HSDL2Q6YN16 418 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 DOLPP1Q86YN1 238 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 GHDCQ8N2G8 530 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 ZCCHC7Q8N3Z6 543 aaKnown RBP17.23■□□□□ 0.35
COL7A1-209ENST00000474432 POGLUT1Q8NBL1 392 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 RGMAQ96B86 450 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 MAGED4Q96JG8 741 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 PHF12Q96QT6 1004 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 CCDC77Q9BR77 488 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 OR8D2Q9GZM6 311 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 VPS11Q9H270 941 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 IPPKQ9H8X2 491 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 ACTR8Q9H981 624 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 CPSF2Q9P2I0 782 aaKnown RBP17.23■□□□□ 0.35
COL7A1-209ENST00000474432 MEMO1Q9Y316 297 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 ASB4Q9Y574 426 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 PCDHGA11Q9Y5H2 935 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 HRH3Q9Y5N1 445 aa17.23■□□□□ 0.35
COL7A1-209ENST00000474432 KLF2Q9Y5W3 355 aaPredicted RBP17.23■□□□□ 0.35
COL7A1-209ENST00000474432 PKDREJQ9NTG1 2253 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 A0A0A6YYD5 115 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 A0A0G2JMM0 328 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 A0A1W2PPB8 328 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 A0A1W2PRS3 328 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 KIR3DP1A8MWS1 328 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 KLRC4-KLRK1H3BQV0 150 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 HRKO00198 91 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 WWP2O00308 870 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 TMPRSS11DO60235 418 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 UGDHO60701 494 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 EEDO75530 441 aaKnown RBP17.22■□□□□ 0.35
COL7A1-209ENST00000474432 IGKV3-11P04433 115 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 SBK3P0C264 359 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 SOX3P41225 446 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 NEK2P51955 445 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 ARFIP1P53367 373 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 RNF4P78317 190 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 MTFR2Q6P444 385 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 RPTNQ6XPR3 784 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 BNC2Q6ZN30 1099 aaPredicted RBP17.22■□□□□ 0.35
COL7A1-209ENST00000474432 GPR180Q86V85 440 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 OR52B6Q8NGF0 335 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 OR8K3Q8NH51 312 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 DCAKDQ8WVC6 231 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 UCN3Q969E3 161 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 PAFAH2Q99487 392 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 ZBTB26Q9HCK0 441 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 PLSCR2Q9NRY7 297 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 PSD3Q9NYI0 1048 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 MTRF1LQ9UGC7 380 aaKnown RBP17.22■□□□□ 0.35
COL7A1-209ENST00000474432 ANGPTL3Q9Y5C1 460 aa17.22■□□□□ 0.35
COL7A1-209ENST00000474432 FBN2P35556 2912 aa17.21■□□□□ 0.35
COL7A1-209ENST00000474432 ARHGAP10A1A4S6 786 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms