RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TSPAN4O14817 238 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 TPOP07202 933 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 INPP1P49441 399 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 ATN1P54259 1190 aaPredicted RBP17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 NFATC2Q13469 925 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 GALEQ14376 348 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 ZNF284Q2VY69 593 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 MPPE1Q53F39 396 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 TAGAPQ8N103 731 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 TOE1Q96GM8 510 aaKnown RBP17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 TM9SF2Q99805 663 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 WACQ9BTA9 647 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 REV1Q9UBZ9 1251 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 ARRDC5A6NEK1 342 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 PRR23AA6NEV1 266 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 SGK494L7N484 410 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 GTPBP1O00178 669 aaKnown RBP17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 CBX4O00257 560 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 SLC9A3R1O14745 358 aaPredicted RBP17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 IRS1P35568 1242 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 ETV5P41161 510 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 ETV1P50549 477 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 LRRC32Q14392 662 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 BRAT1Q6PJG6 821 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 CEACAM20Q6UY09 585 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 OR11H4Q8NGC9 324 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 TM9SF4Q92544 642 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 NDOR1Q9UHB4 597 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 ZFP37Q9Y6Q3 630 aaPredicted RBP17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 ENPP4Q9Y6X5 453 aa17.76■□□□□ 0.43
ECHDC1-214ENST00000474289 TRBV4-1A0A0J9YWV2 114 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 HEPACAM2A8MVW5 462 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 AOAHP28039 575 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 EVX1P49640 407 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 C21orf58P58505 322 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 CCDC85BQ15834 202 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 PLK5Q496M5 336 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 CRTC2Q53ET0 693 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 MFSD14CQ5VZR4 134 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 ZNF57Q68EA5 555 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 LAPTM4BQ86VI4 370 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 TCEANCQ8N8B7 351 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 VPS37AQ8NEZ2 397 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 OR4A15Q8NGL6 344 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 MRPL39Q9NYK5 338 aaKnown RBP17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 VPS29Q9UBQ0 182 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 SLC22A14Q9Y267 594 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 NCKAP1Q9Y2A7 1128 aa17.75■□□□□ 0.43
ECHDC1-214ENST00000474289 AKAP8O43823 692 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 ICAM2P13598 275 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 OSMP13725 252 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 HK1P19367 917 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 ITPKAP23677 461 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 RPS24P62847 133 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 GPR139Q6DWJ6 353 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 TYW3Q6IPR3 259 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 METAP1DQ6UB28 335 aaPredicted RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 TMEM107Q6UX40 140 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 TRILQ7L0X0 811 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 C16orf62Q7Z3J2 963 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 PLEKHH3Q7Z736 793 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 DNAJC5GQ8N7S2 189 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 GTF3C2Q8WUA4 911 aaPredicted RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 UCN3Q969E3 161 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 FBXO32Q969P5 355 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 MTERF1Q99551 399 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 FOLH1BQ9HBA9 442 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 ZNF282Q9UDV7 671 aaPredicted RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 ALDH1A1P00352 501 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 BPIP17213 487 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 RHCEP18577 417 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 ACRV1P26436 265 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 UBE3AQ05086 875 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 DDX39BQ13838 428 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 KCNC3Q14003 757 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 GCNT6Q5T4J0 391 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 CASP12Q6UXS9 341 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 PRSS42Q7Z5A4 293 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 GPALPP1Q8IXQ4 340 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 TTC9BQ8N6N2 239 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 OR52I1Q8NGK6 324 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 HUS1BQ8NHY5 278 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 SUSD3Q96L08 255 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 MED28Q9H204 178 aa17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 DIMT1Q9UNQ2 313 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 RUVBL1Q9Y265 456 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 SF3B6Q9Y3B4 125 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-214ENST00000474289 H3BN98 237 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 H3BNC9 293 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 M0QZ92 97 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 RECKO95980 971 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 AVPR1BP47901 424 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 SLC6A12P48065 614 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 CTBP2P56545 445 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 PURAQ00577 322 aaKnown RBP17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 ACSM2AQ08AH3 577 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 CHIT1Q13231 466 aa17.73■□□□□ 0.43
ECHDC1-214ENST00000474289 ILKQ13418 452 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms