RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 THTPAQ9BU02 230 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 THUMPD3Q9BV44 507 aaKnown RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 LHX9Q9NQ69 397 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC35C2Q9NQQ7 365 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 DHCR7Q9UBM7 475 aaKnown RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 TRPC4Q9UBN4 977 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 BTNL2Q9UIR0 455 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 MRPS2Q9Y399 296 aaKnown RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 LOXL2Q9Y4K0 774 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 ATG4BQ9Y4P1 393 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 ASB4Q9Y574 426 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SNX8Q9Y5X2 465 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 MAU2Q9Y6X3 613 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SCN3AQ9NY46 2000 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 MUC3AQ02505 3323 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 CCDC187A0A096LP49 1063 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 A0A096LPI6 279 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 A0A1W2PR48 441 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 TMEM247A6NEH6 219 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 C9J4A7 227 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 FBP2O00757 339 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 PROM1O43490 865 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 CHST10O43529 356 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 HCRTR1O43613 425 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 MT-CO3P00414 261 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 T-ENOLP0DO92 83 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 ITGAXP20702 1163 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 XCR1P46094 333 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 SIM1P81133 766 aaPredicted RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 ZFP36L1Q07352 338 aaKnown RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 ABHD18Q0P651 414 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 HSPB3Q12988 150 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 PDE7AQ13946 482 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 DSG2Q14126 1118 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 C16orf72Q14CZ0 275 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 MINDY4Q4G0A6 757 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 SAMD4BQ5PRF9 694 aaKnown RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 HES3Q5TGS1 186 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 C1orf189Q5VU69 101 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 C18orf63Q68DL7 685 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 MRM1Q6IN84 353 aaKnown RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 RHBDD2Q6NTF9 364 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 DHRS13Q6UX07 377 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 RAB11FIP2Q7L804 512 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 PRSS41Q7RTY9 318 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 B3GNT8Q7Z7M8 397 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 GLRX5Q86SX6 157 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 PIP4P1Q86T03 277 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 SCUBE1Q8IWY4 988 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 LRRC25Q8N386 305 aaPredicted RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 KIF2BQ8N4N8 673 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 DPP10Q8N608 796 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 TNIP2Q8NFZ5 429 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 OR51Q1Q8NH59 317 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 DNAJB14Q8TBM8 379 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 OR5P2Q8WZ92 322 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 TBC1D20Q96BZ9 403 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 COQ8BQ96D53 544 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 CCDC115Q96NT0 180 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 OR1F2PQ96R84 312 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 CGREF1Q99674 301 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 ECSITQ9BQ95 431 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 PELOQ9BRX2 385 aaKnown RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 RBCK1Q9BYM8 510 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 ASPSCR1Q9BZE9 553 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 ULBP3Q9BZM4 244 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 AICDAQ9GZX7 198 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 SYNPO2LQ9H987 977 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 C3orf14Q9HBI5 128 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 PRTFDC1Q9NRG1 225 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 ACSS1Q9NUB1 689 aaPredicted RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 TAS2R9Q9NYW1 312 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 TAS2R1Q9NYW7 299 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 IFT80Q9P2H3 777 aaPredicted RBP9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 PISDQ9UG56 409 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 PCDHB3Q9Y5E6 796 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 CROCCQ5TZA2 2017 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 ASXL3Q9C0F0 2248 aa9.7□□□□□ -0.86
PRPF38A-202ENST00000474048 B4E171 279 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 GSTA4O15217 222 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 GFRA3O60609 400 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 DNAJA2O60884 412 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 B4GALT2O60909 372 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 CACNA1HO95180 2353 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 KRT75O95678 551 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 C6orf47O95873 294 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 FHP07954 510 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 FTH1P19P0C7X4 201 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 FGF5P12034 268 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 NQO1P15559 274 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 PORP16435 677 aaPredicted RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 EFNA1P20827 205 aaPredicted RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 CSRP1P21291 193 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 SDHBP21912 280 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 TSPAN7P41732 249 aa9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 NOVA1P51513 510 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC7A2P52569 658 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms