RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CCDC149Q6ZUS6 474 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 VASH1Q7L8A9 365 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 ZNF438Q7Z4V0 828 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 NPAS4Q8IUM7 802 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 OR7G3Q8NG95 312 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 FIBINQ8TAL6 211 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 MARVELD3Q96A59 401 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ERLEC1Q96DZ1 483 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ALG14Q96F25 216 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 MED8Q96G25 268 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ZNF764Q96H86 408 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 NELL2Q99435 816 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 PTPN18Q99952 460 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ATG10Q9H0Y0 220 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 FOLH1BQ9HBA9 442 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 RBFOX1Q9NWB1 397 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 STOX2Q9P2F5 926 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 USP34Q70CQ2 3546 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 GLTPD2A6NH11 291 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 GRM6O15303 877 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 GPR39O43194 453 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 ENTPD6O75354 484 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 CYP7B1O75881 506 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 CDRT1O95170 752 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 PRAMEF12O95522 483 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 FURINP09958 794 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 SLC2A2P11168 524 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 C4BPBP20851 252 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 HOXD10P28358 340 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 FGF9P31371 208 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 VIPR1P32241 457 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 CRYBB2P43320 205 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 SLC11A1P49279 550 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 SGSHP51688 502 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 BTG1P62324 171 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 ZNF91Q05481 1191 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 FAPQ12884 760 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 TNK1Q13470 666 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 RGMBQ6NW40 437 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 GALNT10Q86SR1 603 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 CCDC28AQ8IWP9 274 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 DUSP18Q8NEJ0 188 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 OR9Q2Q8NGE9 314 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 HUS1BQ8NHY5 278 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 CREB3L4Q8TEY5 395 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 UBASH3BQ8TF42 649 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 SETD7Q8WTS6 366 aaKnown RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 OTUB1Q96FW1 271 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 PDXPQ96GD0 296 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 DHRS1Q96LJ7 313 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 MCOLN1Q9GZU1 580 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 EPHX3Q9H6B9 360 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 ACOXLQ9NUZ1 547 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 MRPS18AQ9NVS2 196 aaKnown RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 MARCH5Q9NX47 278 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 RABL2AQ9UBK7 228 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 ING4Q9UNL4 249 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 RABL2BQ9UNT1 228 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 TEX51A0A1B0GUA7 166 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 FAM240BA0A1B0GVZ2 78 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 NPIPB15A6NHN6 443 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 A8MU76 341 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 E7EQ34 232 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 MMP20O60882 483 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 C6orf47O95873 294 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 DNTTP04053 509 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 HLA-DPB1P04440 258 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 NUDT7P0C024 238 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 PRKCAP17252 672 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 GABRA5P31644 462 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 RFX2P48378 723 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 EEF1A2Q05639 463 aaKnown RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 HYAL2Q12891 473 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 TPBGQ13641 420 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 GPR19Q15760 415 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 PPP2R2DQ66LE6 453 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 FAM71E1Q6IPT2 247 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 SLC36A4Q6YBV0 504 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 ZNF782Q6ZMW2 699 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 Q6ZPB1 254 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 SPATC1Q76KD6 591 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 PHC2Q8IXK0 858 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 LAS2Q8IYD9 372 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 SLC22A15Q8IZD6 547 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 HS6ST3Q8IZP7 471 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 NLGN4XQ8N0W4 816 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 TMEM163Q8TC26 289 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 MAL2Q969L2 176 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 ZNF354BQ96LW1 612 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 FGF20Q9NP95 211 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 KRCC1Q9NPI7 259 aaPredicted RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 GKN1Q9NS71 199 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 TXNL4BQ9NX01 149 aaKnown RBP5.84□□□□□ -1.47
HERC4-209ENST00000473533 QPCTLQ9NXS2 382 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 PRKAG2Q9UGJ0 569 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 POLHQ9Y253 713 aa5.84□□□□□ -1.47
HERC4-209ENST00000473533 A0A1W2PQL4 384 aaPredicted RBP5.83□□□□□ -1.48
HERC4-209ENST00000473533 OR6C70A6NIJ9 312 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 B4DXG7 233 aa5.83□□□□□ -1.48
HERC4-209ENST00000473533 PCDH17O14917 1159 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms