RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 FOXO1Q12778 655 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 CALCOCO2Q13137 446 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 MROH9Q5TGP6 573 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 RTL6Q6ICC9 239 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 MRM1Q6IN84 353 aaKnown RBP9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 TRIM40Q6P9F5 258 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 CEP128Q6ZU80 1094 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 RPS27LQ71UM5 84 aaKnown RBP9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 LRRC70Q7Z2Q7 622 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 CCDC71Q8IV32 467 aaPredicted RBP9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 C9orf40Q8IXQ3 194 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 TEX9Q8N6V9 391 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 HORMAD2Q8N7B1 307 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 BBOF1Q8ND07 529 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 PSD4Q8NDX1 1056 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 ARMC2Q8NEN0 867 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 OR2M7Q8NG81 312 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 HUS1BQ8NHY5 278 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 TSPAN17Q96FV3 270 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 TREX2Q9BQ50 279 aaPredicted RBP9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 LRRC1Q9BTT6 524 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 EFCAB11Q9BUY7 163 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 CAPS2Q9BXY5 557 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 PITHD1Q9GZP4 211 aaPredicted RBP9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 LYRM4Q9HD34 91 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 SH2D2AQ9NP31 389 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 NPDC1Q9NQX5 325 aaPredicted RBP9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 NUDT4Q9NZJ9 180 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 KLF13Q9Y2Y9 288 aaPredicted RBP9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 YARS2Q9Y2Z4 477 aaKnown RBP9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 RNF11Q9Y3C5 154 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 ZNF407Q9C0G0 2248 aa9.05□□□□□ -0.96
RPRD1B-204ENST00000471511 CACNA1CQ13936 2221 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 A0A1W2PR48 441 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 NKX2-6A6NCS4 301 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 KDM4EB2RXH2 506 aaPredicted RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 E9PLN8 166 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 KLRC4-KLRK1H3BQV0 150 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 PPP6CO00743 305 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 CLDN4O14493 209 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 CDK2AP1O14519 115 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 FCHO1O14526 889 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TFECO14948 347 aaPredicted RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 KLK8O60259 260 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 SUPT3HO75486 399 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 LRATO95237 230 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 ALDOAP04075 364 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TPOP07202 933 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 GSTA2P09210 222 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 LTA4HP09960 611 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 RFPL3SP0C7P2 107 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 AGAP20933 346 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 GSTM2P28161 218 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 BSGP35613 385 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 SOX18P35713 384 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 RPS13P62277 151 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 ETF1P62495 437 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 PPIAP62937 165 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TFF3Q07654 80 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 ASPHQ12797 758 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 SLAMF1Q13291 335 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 DDX39BQ13838 428 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 SLMAPQ14BN4 828 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 PFKFB4Q16877 469 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 PIGGQ5H8A4 983 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 KHDRBS2Q5VWX1 349 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 OR4C11Q6IEV9 310 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 MED27Q6P2C8 311 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 HSDL2Q6YN16 418 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 ZNF572Q7Z3I7 529 aaPredicted RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 MAATS1Q7Z4T9 603 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TMEM132CQ8N3T6 1108 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TMEM251Q8N6I4 163 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 MORN4Q8NDC4 146 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 STAG3L4Q8TBR4 150 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 PHF10Q8WUB8 498 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 CDKL2Q92772 493 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TMEM125Q96AQ2 219 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 SDCCAG3Q96C92 435 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 SENP5Q96HI0 755 aaPredicted RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 SEC16BQ96JE7 1060 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 CDK15Q96Q40 435 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 MTERF1Q99551 399 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 VKORC1Q9BQB6 163 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TBCDQ9BTW9 1192 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TTTY12Q9BZ98 90 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 ENKD1Q9H0I2 346 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 ZDHHC11Q9H8X9 412 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 CNOT10Q9H9A5 744 aaKnown RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 NMRAL1Q9HBL8 299 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 DMRT3Q9NQL9 472 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 PNPLA3Q9NST1 481 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 TUBA8Q9NY65 449 aaPredicted RBP9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 NINJ2Q9NZG7 142 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 PPT2Q9UMR5 302 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 RNF6Q9Y252 685 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 ASB4Q9Y574 426 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 EML6Q6ZMW3 1958 aa9.04□□□□□ -0.96
RPRD1B-204ENST00000471511 CELSR1Q9NYQ6 3014 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms