RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GTF3C1Q12789 2109 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 PFASO15067 1338 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 ILVBLA1L0T0 632 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 HTR3EA5X5Y0 456 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 ANKDD1BA6NHY2 528 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 NEDD8-MDP1E9PL57 170 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 TNFSF11O14788 317 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 SELENOFO60613 162 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 DUSP11O75319 330 aaKnown RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 GRAP2O75791 330 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 RPN1P04843 607 aaKnown RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 LDHCP07864 332 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 FHP07954 510 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 FCGR3AP08637 254 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 FOSL2P15408 326 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 GJB2P29033 226 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 PPP2R1AP30153 589 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 HMGCLP35914 325 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 MDH2P40926 338 aaKnown RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 RGRP47804 291 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 FHITP49789 147 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 MEOX2P50222 304 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 CAPZA1P52907 286 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 FKBP1BP68106 108 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 ABRQ12979 859 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 SLC17A1Q14916 467 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 GSG1Q2KHT4 349 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 C14orf28Q4W4Y0 310 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 HERC4Q5GLZ8 1057 aaPredicted RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 SPOUT1Q5T280 376 aaKnown RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 KHDRBS2Q5VWX1 349 aaKnown RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 LYPLAL1Q5VWZ2 237 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 PM20D1Q6GTS8 502 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 SPATA21Q7Z572 469 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 DZIP1Q86YF9 867 aaKnown RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 Q8NFD4 153 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 SEPT8Q92599 483 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 EXOC4Q96A65 974 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 SIPA1Q96FS4 1042 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 BSCL2Q96G97 398 aaPredicted RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF274Q96GC6 653 aaPredicted RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 RBM18Q96H35 190 aaKnown RBP0.99□□□□□ -2.25
UBXN4-207ENST00000471246 FERMT1Q9BQL6 677 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 ATG101Q9BSB4 218 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 PAXXQ9BUH6 204 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 ASB8Q9H765 288 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF665Q9H7R5 613 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 NT5DC2Q9H857 520 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 MINDY3Q9H8M7 445 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 VIPAS39Q9H9C1 493 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 AMBNQ9NP70 447 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 PFDN4Q9NQP4 134 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 VNN3Q9NY84 501 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF319Q9P2F9 582 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 CHD4Q14839 1912 aa0.99□□□□□ -2.25
UBXN4-207ENST00000471246 NACAE9PAV3 2078 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ARID1AO14497 2285 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ZNFX1Q9P2E3 1918 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ARHGEF37A1IGU5 675 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 KBTBD13C9JR72 458 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 SAP18O00422 153 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 CTDSPLO15194 276 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 EIF5BO60841 1220 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 CSO75390 466 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 CSDE1O75534 798 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 LETM1O95202 739 aaPredicted RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 CCDC159P0C7I6 412 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ODC1P11926 461 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 P4HA1P13674 534 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ELK1P19419 428 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 GDF1P27539 372 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 MAGEA9P43362 315 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 NPBWR1P48145 328 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 FNTAP49354 379 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 RPL27P61353 136 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 GSTO1P78417 241 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 CXCL6P80162 114 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 SLC3A1Q07837 685 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 LCP2Q13094 533 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 CNPY1Q3B7I2 92 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 IQCCQ4KMZ1 466 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 C9orf129Q5T035 196 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 DCAF12Q5T6F0 453 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 WDR25Q64LD2 544 aaPredicted RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 TRAT1Q6PIZ9 186 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ABRAXAS1Q6UWZ7 409 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 SPATA19Q7Z5L4 167 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 SLFN11Q7Z7L1 901 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ANKRD46Q86W74 232 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 UBQLNLQ8IYU4 475 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 KIAA0895Q8NCT3 520 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 CCDC197Q8NCU1 140 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 OR1K1Q8NGR3 316 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF671Q8TAW3 534 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 VN1R17PQ8TDU5 208 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 TBCKQ8TEA7 893 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 MRPL24Q96A35 216 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 NTNG2Q96CW9 530 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 CDHR1Q96JP9 859 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF285Q96NJ3 590 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms