RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TEX10Q9NXF1 929 aaPredicted RBP18.51■□□□□ 0.55
HDAC7-220ENST00000471235 ARHGAP10A1A4S6 786 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 SAGE2PA6NJ88 616 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 TMEM233B4DJY2 109 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 FGF17O60258 216 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 LDB3O75112 727 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 SERPINE1P05121 402 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 BUD31P41223 144 aaPredicted RBP18.5■□□□□ 0.55
HDAC7-220ENST00000471235 MAPK12P53778 367 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 WDR4P57081 412 aaKnown RBP18.5■□□□□ 0.55
HDAC7-220ENST00000471235 SLC26A5P58743 744 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 CHI3L2Q15782 390 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 BTBD16Q32M84 506 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 CCNYL2Q5T2Q4 361 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 IRAK1BP1Q5VVH5 260 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 RIPOR1Q6ZS17 1223 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 ASB18Q6ZVZ8 466 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 PPP1R14CQ8TAE6 165 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 BRIX1Q8TDN6 353 aaKnown RBP18.5■□□□□ 0.55
HDAC7-220ENST00000471235 CHTF18Q8WVB6 975 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 ANKRD9Q96BM1 317 aaPredicted RBP18.5■□□□□ 0.55
HDAC7-220ENST00000471235 APIPQ96GX9 242 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 RPF2Q9H7B2 306 aaKnown RBP18.5■□□□□ 0.55
HDAC7-220ENST00000471235 ZNF451Q9Y4E5 1061 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 PTGDR2Q9Y5Y4 395 aa18.5■□□□□ 0.55
HDAC7-220ENST00000471235 MYOCOSA0A1B0GUC4 107 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 A8MUA0 341 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 ITGAMP11215 1152 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 TLX1P31314 330 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-220ENST00000471235 RAE1P78406 368 aaKnown RBP18.49■□□□□ 0.55
HDAC7-220ENST00000471235 IGLV3-21P80748 117 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-220ENST00000471235 ID2Q02363 134 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 ACSM2AQ08AH3 577 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 NFATC3Q12968 1075 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 EXT1Q16394 746 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 IMPG1Q17R60 797 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 SPIN4Q56A73 249 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 TTMPQ5BVD1 217 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 SH2D4BQ5SQS7 431 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 HHATQ5VTY9 493 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 ACSM2BQ68CK6 577 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 RNF165Q6ZSG1 346 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 TRIM46Q7Z4K8 759 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 AGR3Q8TD06 166 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 MGARPQ8TDB4 240 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 SH3GL2Q99962 352 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 TUBB1Q9H4B7 451 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 ADAP2Q9NPF8 381 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 MCM8Q9UJA3 840 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 PCDHGB7Q9Y5F8 929 aa18.49■□□□□ 0.55
HDAC7-220ENST00000471235 SYNDIG1LA6NDD5 238 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 EIF4E1BA6NMX2 242 aaKnown RBP18.48■□□□□ 0.55
HDAC7-220ENST00000471235 TMEM114B3SHH9 223 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 PCDH7O60245 1069 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 KLHL41O60662 606 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 LYPLA1O75608 230 aaPredicted RBP18.48■□□□□ 0.55
HDAC7-220ENST00000471235 FGF4P08620 206 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 BGNP21810 368 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 TIA1P31483 386 aaKnown RBP eCLIP18.48■□□□□ 0.55
HDAC7-220ENST00000471235 SLC18A1P54219 525 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 FOLH1Q04609 750 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 BTKQ06187 659 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 STX4Q12846 297 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 OR52E8Q6IFG1 317 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 ZNF843Q8N446 348 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 NFAM1Q8NET5 270 aaPredicted RBP18.48■□□□□ 0.55
HDAC7-220ENST00000471235 M1APQ8TC57 530 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 TWIST2Q8WVJ9 160 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 PSMF1Q92530 271 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 UCN3Q969E3 161 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 PAIP2Q9BPZ3 127 aaKnown RBP18.48■□□□□ 0.55
HDAC7-220ENST00000471235 WDR41Q9HAD4 459 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 PNO1Q9NRX1 252 aaKnown RBP18.48■□□□□ 0.55
HDAC7-220ENST00000471235 TRAF6Q9Y4K3 522 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 CCL27Q9Y4X3 112 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 DNAJC15Q9Y5T4 150 aa18.48■□□□□ 0.55
HDAC7-220ENST00000471235 GLOD5A6NK44 160 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 ITM2AO43736 263 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 SASH3O75995 380 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 RSL1D1O76021 490 aaKnown RBP18.47■□□□□ 0.55
HDAC7-220ENST00000471235 MYO1DO94832 1006 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 HSPA4LO95757 839 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 CHEK2O96017 543 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 ALPPP05187 535 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 ICAM2P13598 275 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 SOX11P35716 441 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 AP2B1P63010 937 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 SERTAD2Q14140 314 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 TERF2Q15554 542 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 ELAVL1Q15717 326 aaKnown RBP18.47■□□□□ 0.55
HDAC7-220ENST00000471235 UGT3A2Q3SY77 523 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 SPDYAQ5MJ70 313 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 NDUFAF5Q5TEU4 345 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 AGAP7PQ5VUJ5 663 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 JMJD6Q6NYC1 403 aaPredicted RBP18.47■□□□□ 0.55
HDAC7-220ENST00000471235 OR4N5Q8IXE1 308 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 SIRT6Q8N6T7 355 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 OR2T11Q8NH01 316 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 TANKQ92844 425 aa18.47■□□□□ 0.55
HDAC7-220ENST00000471235 C11orf24Q96F05 449 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms