RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 RNF4P78317 190 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 HP1BP3Q5SSJ5 553 aaPredicted RBP12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 ARSKQ6UWY0 536 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 IGDCC3Q8IVU1 814 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 TCAIMQ8N3R3 496 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 OR8K3Q8NH51 312 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 LRRC46Q96FV0 321 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 QRFPRQ96P65 431 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 TMUB1Q9BVT8 246 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 ROGDIQ9GZN7 287 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 CNOT10Q9H9A5 744 aaKnown RBP12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 WWOXQ9NZC7 414 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 B4GALT7Q9UBV7 327 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 VTI1BQ9UEU0 232 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 Q9UFV3 132 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 L3MBTL1Q9Y468 752 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 CLDN16Q9Y5I7 305 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM215AQ9Y5M1 114 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 PRRC2AP48634 2157 aaKnown RBP12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 TRGV5A0A0B4J1U4 118 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 NCF1BA6NI72 391 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 NCF1CA8MVU1 366 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 CYR61O00622 381 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 EIF3HO15372 352 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 RAD51CO43502 376 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 DYRK3O43781 588 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 HCN1O60741 890 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 COX7A2P14406 83 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 NCF1P14598 390 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 DNASE1P24855 282 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 KIR2DL3P43628 341 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 RPL21P46778 160 aaKnown RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 SLC6A12P48065 614 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 KCNC1P48547 511 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 DNASE1L1P49184 302 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 SLC12A2P55011 1212 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 CAV1Q03135 178 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 ZNF460Q14592 562 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 TSNQ15631 228 aaKnown RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 HIST2H2ACQ16777 129 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 ADPRMQ3LIE5 342 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 HIST2H2AA3Q6FI13 130 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 ABHD17CQ6PCB6 329 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 TRMT10BQ6PF06 316 aaKnown RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 TGIF2LYQ8IUE0 185 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 ZZZ3Q8IYH5 903 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 SRFBP1Q8NEF9 429 aaKnown RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 GOT1L1Q8NHS2 421 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 SLC2A12Q8TD20 617 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 PTPMT1Q8WUK0 201 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 RHBDF1Q96CC6 855 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 RMND5BQ96G75 393 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 CSF3RQ99062 836 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 RAB17Q9H0T7 212 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 CCM2LQ9NUG4 571 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 DNAJC11Q9NVH1 559 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 TUBA8Q9NY65 449 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 UTP11Q9Y3A2 253 aaKnown RBP12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 TEX264Q9Y6I9 313 aa12.83□□□□□ -0.36
SEMA3F-208ENST00000470737 LDB3O75112 727 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 CTAG2O75638 210 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 CCL3P10147 92 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 ARL4CP56559 192 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 KCNJ2P63252 427 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 MGAT5Q09328 741 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 TBL3Q12788 808 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 CALCOCO2Q13137 446 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 LAPTM5Q13571 262 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 HYAL4Q2M3T9 481 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 C18orf21Q32NC0 220 aaPredicted RBP12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 PAGE2BQ5JRK9 111 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 RIPPLY2Q5TAB7 128 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 STEAP4Q687X5 459 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 RTL6Q6ICC9 239 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 LIX1Q8N485 282 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 SNX31Q8N9S9 440 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 SLC22A8Q8TCC7 542 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 PTCD3Q96EY7 689 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 GPATCH1Q9BRR8 931 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 EFCAB11Q9BUY7 163 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 CXXC4Q9H2H0 198 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 CLEC4MQ9H2X3 399 aaPredicted RBP12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 EHD1Q9H4M9 534 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 LYRM4Q9HD34 91 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 NSMCE4AQ9NXX6 385 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 ST6GALNAC2Q9UJ37 374 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 BOKQ9UMX3 212 aaPredicted RBP12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 ATG4BQ9Y4P1 393 aa12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-208ENST00000470737 URI1O94763 535 aaPredicted RBP12.81□□□□□ -0.36
SEMA3F-208ENST00000470737 CELA3AP09093 270 aa12.81□□□□□ -0.36
SEMA3F-208ENST00000470737 KLK2P20151 261 aa12.81□□□□□ -0.36
SEMA3F-208ENST00000470737 UQCRC1P31930 480 aa12.81□□□□□ -0.36
SEMA3F-208ENST00000470737 ADH7P40394 386 aa12.81□□□□□ -0.36
SEMA3F-208ENST00000470737 DLX5P56178 289 aa12.81□□□□□ -0.36
SEMA3F-208ENST00000470737 TAS2R39P59534 338 aa12.81□□□□□ -0.36
SEMA3F-208ENST00000470737 FOXO1Q12778 655 aa12.81□□□□□ -0.36
SEMA3F-208ENST00000470737 ASPHQ12797 758 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 237.6 ms