RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ELK4P28324 431 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 UBE2IP63279 158 aaKnown RBP17.32■□□□□ 0.36
COL9A3-205ENST00000466192 SLAMF1Q13291 335 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 KCNAB2Q13303 367 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 TBC1D25Q3MII6 688 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 TMEM26Q6ZUK4 368 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 DEFB119Q8N690 84 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 NATD1Q8N6N6 113 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 ACOT4Q8N9L9 421 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 NFKBIDQ8NI38 313 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 KLHDC7BQ96G42 594 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 RBM38Q9H0Z9 239 aaKnown RBP17.32■□□□□ 0.36
COL9A3-205ENST00000466192 ING2Q9H160 280 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 IFT80Q9P2H3 777 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-205ENST00000466192 A0A087WXM4 84 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 WASHC1A8K0Z3 465 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 PRKRAO75569 313 aaKnown RBP17.32■□□□□ 0.36
COL9A3-205ENST00000466192 ATP5A1P25705 553 aaKnown RBP17.32■□□□□ 0.36
COL9A3-205ENST00000466192 NUDT1P36639 197 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 RAB8AP61006 207 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 KCNJ10P78508 379 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 FADDQ13158 208 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 C1orf61Q13536 156 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 SCARB2Q14108 478 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 SLC9A5Q14940 896 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 TTC23Q5W5X9 447 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 FBXO42Q6P3S6 717 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 TRIM40Q6P9F5 258 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 Q7L0L9 218 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 TAF8Q7Z7C8 310 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 ZNF555Q8NEP9 628 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 B4GALNT2Q8NHY0 566 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 SLC37A2Q8TED4 501 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 ACTR10Q9NZ32 417 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 TMEFF2Q9UIK5 374 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-205ENST00000466192 C3orf18Q9UK00 162 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 ASB4Q9Y574 426 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 ABCA7Q8IZY2 2146 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 GSAPA4D1B5 854 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 OR2A25A4D2G3 310 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 TMEM229AB2RXF0 380 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 KRT75O95678 551 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 DRD2P14416 443 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 ARHGDIAP52565 204 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 RPS15AP62244 130 aaKnown RBP17.31■□□□□ 0.36
COL9A3-205ENST00000466192 EPS8Q12929 822 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 HSPB3Q12988 150 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 MRM1Q6IN84 353 aaKnown RBP17.31■□□□□ 0.36
COL9A3-205ENST00000466192 DCP2Q8IU60 420 aaKnown RBP17.31■□□□□ 0.36
COL9A3-205ENST00000466192 ZC3H7AQ8IWR0 971 aaKnown RBP17.31■□□□□ 0.36
COL9A3-205ENST00000466192 ZFPM2Q8WW38 1151 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 NLNQ9BYT8 704 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 SIRT3Q9NTG7 399 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-205ENST00000466192 POT1Q9NUX5 634 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 IRAK4Q9NWZ3 460 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 TAS2R7Q9NYW3 318 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 MRPS17Q9Y2R5 130 aaKnown RBP17.31■□□□□ 0.36
COL9A3-205ENST00000466192 PCDHGA2Q9Y5H1 932 aa17.31■□□□□ 0.36
COL9A3-205ENST00000466192 TRIM64A6NGJ6 449 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 H3BSA7 217 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 BMP10O95393 424 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 CERS1P27544 350 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 POLR2IP36954 125 aaKnown RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 ALDH3B2P48448 385 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 ARFIP1P53367 373 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 TPD52P55327 224 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 STARD6P59095 220 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 DGLUCYQ7Z3D6 616 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 GALNT5Q7Z7M9 940 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 C8orf59Q8N0T1 100 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 KCT2Q8NC54 265 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 TBC1D20Q96BZ9 403 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 C7orf34Q96L11 122 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 DOHHQ9BU89 302 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 TMEM38AQ9H6F2 299 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 TUBA8Q9NY65 449 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 SAMHD1Q9Y3Z3 626 aaKnown RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 ATG4BQ9Y4P1 393 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 ORC6Q9Y5N6 252 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 A0A1W2PR48 441 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 GLOD5A6NK44 160 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 B4GAT1O43505 415 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 TNFSF14O43557 240 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 CTSVO60911 334 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 MITFO75030 526 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 CTSEP14091 401 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 DDX5P17844 614 aaKnown RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 DNAJA1P31689 397 aaKnown RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 CDK9P50750 372 aaKnown RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 SH3BGRP55822 239 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 SNRPNP63162 240 aaKnown RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 SELENOWP63302 87 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 EEF1A2Q05639 463 aaKnown RBP17.3■□□□□ 0.36
COL9A3-205ENST00000466192 RBBP4Q09028 425 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 FCRL6Q6DN72 434 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 THAP5Q7Z6K1 395 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 CYP4Z1Q86W10 505 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 PARGQ86W56 976 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 SPPL2AQ8TCT8 520 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 ZBED6CLQ96FA7 236 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms