RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 BUD31P41223 144 aaPredicted RBP19.04■□□□□ 0.64
SKA3-205ENST00000465471 RAE1P78406 368 aaKnown RBP19.04■□□□□ 0.64
SKA3-205ENST00000465471 SLC13A2Q13183 592 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 TERF2Q15554 542 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 CHI3L2Q15782 390 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 LACTB2Q53H82 288 aaPredicted RBP19.04■□□□□ 0.64
SKA3-205ENST00000465471 SPIN4Q56A73 249 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 TTMPQ5BVD1 217 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 VWA5B1Q5TIE3 1220 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 GALNT18Q6P9A2 607 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 SCIMPQ6UWF3 145 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 KBTBD2Q8IY47 623 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 ANKRD42Q8N9B4 389 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 PSMF1Q92530 271 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 ANKRD9Q96BM1 317 aaPredicted RBP19.04■□□□□ 0.64
SKA3-205ENST00000465471 APIPQ96GX9 242 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 ATP6V1G3Q96LB4 118 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 LPAR4Q99677 370 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 LHPPQ9H008 270 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 TUBB1Q9H4B7 451 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 RPF2Q9H7B2 306 aaKnown RBP19.04■□□□□ 0.64
SKA3-205ENST00000465471 TEX10Q9NXF1 929 aaPredicted RBP19.04■□□□□ 0.64
SKA3-205ENST00000465471 MCM8Q9UJA3 840 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 DNAJC15Q9Y5T4 150 aa19.04■□□□□ 0.64
SKA3-205ENST00000465471 WDR91A4D1P6 747 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 SAGE2PA6NJ88 616 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 TMEM233B4DJY2 109 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 FGF17O60258 216 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 PRKRAO75569 313 aaKnown RBP19.03■□□□□ 0.64
SKA3-205ENST00000465471 RSL1D1O76021 490 aaKnown RBP19.03■□□□□ 0.64
SKA3-205ENST00000465471 NR2F6P10588 404 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 ICAM2P13598 275 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 TLX1P31314 330 aaPredicted RBP19.03■□□□□ 0.64
SKA3-205ENST00000465471 CCNYL2Q5T2Q4 361 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 CLNKQ7Z7G1 428 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 CLYBLQ8N0X4 340 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 NFAM1Q8NET5 270 aaPredicted RBP19.03■□□□□ 0.64
SKA3-205ENST00000465471 TANKQ92844 425 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 THOC3Q96J01 351 aaKnown RBP19.03■□□□□ 0.64
SKA3-205ENST00000465471 PPIEQ9UNP9 301 aaKnown RBP19.03■□□□□ 0.64
SKA3-205ENST00000465471 TRAF6Q9Y4K3 522 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 SPTA1P02549 2419 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 CPAMD8Q8IZJ3 1885 aa19.03■□□□□ 0.64
SKA3-205ENST00000465471 ITM2AO43736 263 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 KLHL41O60662 606 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 LDB3O75112 727 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 C1QL1O75973 258 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 NR1D1P20393 614 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 GRK2P25098 689 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 PPP2R1BP30154 601 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 SOX11P35716 441 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 PGDP52209 483 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 MAPK12P53778 367 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 SLC26A5P58743 744 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 TRA2BP62995 288 aaKnown RBP19.02■□□□□ 0.64
SKA3-205ENST00000465471 AP2B1P63010 937 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 ACSM2AQ08AH3 577 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 RAPSNQ13702 412 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 SERTAD2Q14140 314 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 EXT1Q16394 746 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 SH2D4BQ5SQS7 431 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 ACSM2BQ68CK6 577 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 JMJD6Q6NYC1 403 aaPredicted RBP19.02■□□□□ 0.64
SKA3-205ENST00000465471 M1APQ8TC57 530 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 METTL2AQ96IZ6 378 aaKnown RBP19.02■□□□□ 0.64
SKA3-205ENST00000465471 C20orf27Q9GZN8 174 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 MMP25Q9NPA2 562 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 ADAP2Q9NPF8 381 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 C5AR2Q9P296 337 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 VTI1BQ9UEU0 232 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 ZDHHC2Q9UIJ5 367 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 HAO1Q9UJM8 370 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 G3BP2Q9UN86 482 aaKnown RBP19.02■□□□□ 0.64
SKA3-205ENST00000465471 PTGDR2Q9Y5Y4 395 aa19.02■□□□□ 0.64
SKA3-205ENST00000465471 ARHGAP10A1A4S6 786 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 LYPLA1O75608 230 aaPredicted RBP19.01■□□□□ 0.63
SKA3-205ENST00000465471 SNUPNO95149 360 aaKnown RBP19.01■□□□□ 0.63
SKA3-205ENST00000465471 CHEK2O96017 543 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 ITGAMP11215 1152 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 BGNP21810 368 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 TIA1P31483 386 aaKnown RBP eCLIP19.01■□□□□ 0.63
SKA3-205ENST00000465471 ABCE1P61221 599 aaKnown RBP19.01■□□□□ 0.63
SKA3-205ENST00000465471 ACTN3Q08043 901 aaPredicted RBP19.01■□□□□ 0.63
SKA3-205ENST00000465471 BTBD16Q32M84 506 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 NDUFAF5Q5TEU4 345 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 HHATQ5VTY9 493 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 OR52E8Q6IFG1 317 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 IGFL2Q6UWQ7 119 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 Q6ZSR9 355 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 C7orf57Q8NEG2 295 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 OR2T11Q8NH01 316 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 PPP1R14CQ8TAE6 165 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 DNAJB14Q8TBM8 379 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 TWIST2Q8WVJ9 160 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 TM4SF18Q96CE8 201 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 SORT1Q99523 831 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 ALOXE3Q9BYJ1 711 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 ZNF71Q9NQZ8 489 aaPredicted RBP19.01■□□□□ 0.63
SKA3-205ENST00000465471 ZNF451Q9Y4E5 1061 aa19.01■□□□□ 0.63
SKA3-205ENST00000465471 SPENQ96T58 3664 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms