RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PUM1Q14671 1186 aaKnown RBP eCLIP16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 TIGD2Q4W5G0 525 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 SPIN4Q56A73 249 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 C3orf38Q5JPI3 329 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 OGFRL1Q5TC84 451 aaPredicted RBP16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 YOD1Q5VVQ6 348 aaPredicted RBP16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 GALNT18Q6P9A2 607 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 ZNF793Q6ZN11 406 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 TTLL10Q6ZVT0 673 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 DHFR2Q86XF0 187 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 PTRH1Q86Y79 214 aaKnown RBP16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 PDSS2Q86YH6 399 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 AQP12AQ8IXF9 295 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 KBTBD2Q8IY47 623 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 SLC38A9Q8NBW4 561 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 CATSPER1Q8NEC5 780 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 RNF31Q96EP0 1072 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 TAAR9Q96RI9 348 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 ECSITQ9BQ95 431 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 NDC1Q9BTX1 674 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 PCDHAC1Q9H158 963 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 DDX31Q9H8H2 851 aaKnown RBP16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 SIRT5Q9NXA8 310 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 DHCR7Q9UBM7 475 aaKnown RBP16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 PCDHB3Q9Y5E6 796 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 B3GALT1Q9Y5Z6 326 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 GALR3O60755 368 aaPredicted RBP16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 KLHL18O94889 574 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 GBAP04062 536 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 IL6P05231 212 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 KLK1P06870 262 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 ATP5A1P25705 553 aaKnown RBP16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 ARSFP54793 590 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 RAB15P59190 212 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 FXNQ16595 210 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 DCAF12Q5T6F0 453 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 LCN8Q6JVE9 175 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 IZUMO2Q6UXV1 221 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 CEACAM20Q6UY09 585 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 ACOT4Q8N9L9 421 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 OR9A4Q8NGU2 314 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 DNAJB8Q8NHS0 232 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 AHCTF1Q8WYP5 2266 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 FCRL1Q96LA6 429 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 DPY30Q9C005 99 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 CLMPQ9H6B4 373 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 IL1RL2Q9HB29 575 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 ACTR3BQ9P1U1 418 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 RIMS3Q9UJD0 308 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 NAALAD2Q9Y3Q0 740 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 SCN3AQ9NY46 2000 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 A0A0A6YYC8 382 aaPredicted RBP16■□□□□ 0.15
EXOSC3-203ENST00000465229 I3L1I5 382 aaPredicted RBP16■□□□□ 0.15
EXOSC3-203ENST00000465229 DNAJB6O75190 326 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 SCELO95171 688 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 NTRK1P04629 796 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 BCKDHAP12694 445 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 HIST1H1TP22492 207 aaPredicted RBP16■□□□□ 0.15
EXOSC3-203ENST00000465229 ALAS2P22557 587 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 TPP2P29144 1249 aaPredicted RBP16■□□□□ 0.15
EXOSC3-203ENST00000465229 SLC7A1P30825 629 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 SSR2P43308 183 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 TSFMP43897 325 aaKnown RBP16■□□□□ 0.15
EXOSC3-203ENST00000465229 TRIP10Q15642 601 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 RHBDD2Q6NTF9 364 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 NOXRED1Q6NXP6 359 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 DLEU7Q6UYE1 221 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 PAGE2Q7Z2X7 111 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 NUDT13Q86X67 352 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 LIX1Q8N485 282 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 LRGUKQ96M69 825 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 ASPSCR1Q9BZE9 553 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 ANKHQ9HCJ1 492 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 BATF3Q9NR55 127 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 ADAM29Q9UKF5 820 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 SRPK3Q9UPE1 567 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 DLGAP4Q9Y2H0 992 aa16■□□□□ 0.15
EXOSC3-203ENST00000465229 A0A0A6YYD5 115 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 SGK494L7N484 410 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 DSCR3O14972 297 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 NSA2O95478 260 aaKnown RBP15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 ZNF28P17035 718 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 CERS1P27544 350 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 TIA1P31483 386 aaKnown RBP eCLIP15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 CLNS1AP54105 237 aaKnown RBP15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 CLDN8P56748 225 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 CAPRIN1Q14444 709 aaKnown RBP15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 NANOGP8Q6NSW7 305 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 ZCCHC7Q8N3Z6 543 aaKnown RBP15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 ADCY4Q8NFM4 1077 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 ZPBPQ9BS86 351 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 EFHD1Q9BUP0 239 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 DDA1Q9BW61 102 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 ROGDIQ9GZN7 287 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 NANOGQ9H9S0 305 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 NDOR1Q9UHB4 597 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 AP3M1Q9Y2T2 418 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 TMEM184BQ9Y519 407 aaPredicted RBP15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 AP4S1Q9Y587 144 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 PCDHGA8Q9Y5G5 932 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms