RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PEX1O43933 1283 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 PRKNO60260 465 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-207ENST00000461798 SUPT3HO75486 399 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 TGFB1P01137 390 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 ALDOAP04075 364 aaKnown RBP8.51□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF24P17028 368 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 PTX3P26022 381 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-207ENST00000461798 PHBP35232 272 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 MAGEA12P43365 314 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 MEOX1P50221 254 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 SSR4P51571 173 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 SMSP52788 366 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 ALDH18A1P54886 795 aaKnown RBP8.51□□□□□ -1.05
BRCA1-207ENST00000461798 ADORA2A-AS1P86434 159 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 IRF9Q00978 393 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 STX4Q12846 297 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 BMPR2Q13873 1038 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 WHAMMP3Q1A5X7 153 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 MROH9Q5TGP6 573 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 C8orf74Q6P047 294 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 HSDL2Q6YN16 418 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 MDGA2Q7Z553 956 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 FGD2Q7Z6J4 655 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 DOLPP1Q86YN1 238 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 CYP4Z2PQ8N1L4 340 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 ZCCHC7Q8N3Z6 543 aaKnown RBP8.51□□□□□ -1.05
BRCA1-207ENST00000461798 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 TEX9Q8N6V9 391 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 L3MBTL4Q8NA19 623 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 OR5L2Q8NGL0 311 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 HUS1BQ8NHY5 278 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 PHF10Q8WUB8 498 aaKnown RBP8.51□□□□□ -1.05
BRCA1-207ENST00000461798 EXT2Q93063 718 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 ISL2Q96A47 359 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 RGMAQ96B86 450 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 MAGED4Q96JG8 741 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 RUBCNLQ9H714 662 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 CHST11Q9NPF2 352 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 TIMMDC1Q9NPL8 285 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 SNX15Q9NRS6 342 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 NINJ2Q9NZG7 142 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 PPT2Q9UMR5 302 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 MEMO1Q9Y316 297 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 PCDHGA11Q9Y5H2 935 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 SPACA6W5XKT8 324 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 E9PLN8 166 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 FOXE1O00358 373 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-207ENST00000461798 ADAM10O14672 748 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 OR2J2O76002 312 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 IGKV3-11P04433 115 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 IFNA16P05015 189 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 ESRRAP11474 423 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-207ENST00000461798 PCNAP12004 261 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 TNNI3P19429 210 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 CPN2P22792 545 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 TYK2P29597 1187 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 STT3AP46977 705 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 PIK3CGP48736 1102 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 SERPINB8P50452 374 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 RNF4P78317 190 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 SLAMF1Q13291 335 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 CUL3Q13618 768 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 PFKFB4Q16877 469 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 MPEG1Q2M385 716 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 CMPK2Q5EBM0 449 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 MRM1Q6IN84 353 aaKnown RBP8.5□□□□□ -1.05
BRCA1-207ENST00000461798 KLC3Q6P597 504 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 CLNKQ7Z7G1 428 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 GPR180Q86V85 440 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 SLC44A1Q8WWI5 657 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 TANKQ92844 425 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 REPS1Q96D71 796 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 SGCZQ96LD1 299 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 RASL10BQ96S79 203 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 DMRTA2Q96SC8 542 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 VKORC1Q9BQB6 163 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 CENPKQ9BS16 269 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF717Q9BY31 904 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-207ENST00000461798 TSPAN10Q9H1Z9 355 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-207ENST00000461798 OR51B5Q9H339 312 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 DDX31Q9H8H2 851 aaKnown RBP8.5□□□□□ -1.05
BRCA1-207ENST00000461798 ACTR8Q9H981 624 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 CELSR2Q9HCU4 2923 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 DMRT3Q9NQL9 472 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 MTRF1LQ9UGC7 380 aaKnown RBP8.5□□□□□ -1.05
BRCA1-207ENST00000461798 DMGDHQ9UI17 866 aaKnown RBP8.5□□□□□ -1.05
BRCA1-207ENST00000461798 PHF11Q9UIL8 331 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 TINAGQ9UJW2 476 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 TMCO1Q9UM00 188 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 ANGPTL3Q9Y5C1 460 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 MYO9AB2RTY4 2548 aa8.5□□□□□ -1.05
BRCA1-207ENST00000461798 A8MVJ9 347 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 C17orf105B2RV13 164 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 PLPP1O14494 284 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 PRRG2O14669 202 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 PROM1O43490 865 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 FGF17O60258 216 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 LDB3O75112 727 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 URI1O94763 535 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 OR6B1O95007 311 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms