RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 ANKRD9Q96BM1 317 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-229ENST00000460826 TM4SF18Q96CE8 201 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 IP6K3Q96PC2 410 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 WDR77Q9BQA1 342 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-229ENST00000460826 THAP1Q9NVV9 213 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 SIRT5Q9NXA8 310 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 MCM8Q9UJA3 840 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 LHX6Q9UPM6 363 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
HDLBP-229ENST00000460826 POLR3HQ9Y535 204 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-229ENST00000460826 SPACA6W5XKT8 324 aa13.14□□□□□ -0.31
HDLBP-229ENST00000460826 IGHV1-45A0A0A0MS14 117 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 TCRBV16S1A1N1A0A5B0 115 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 KLF11O14901 512 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 LSM1O15116 133 aaKnown RBP13.13□□□□□ -0.31
HDLBP-229ENST00000460826 PGRMC2O15173 223 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 RGS14O43566 566 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 FGF17O60258 216 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 CTNSO60931 367 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 SEC22BO75396 215 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 SEC24DO94855 1032 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-229ENST00000460826 CELA2AP08217 269 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 NR2F6P10588 404 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 Q0VFX4 171 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 KIAA0040Q15053 153 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 NR6A1Q15406 480 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 PDCD2Q16342 344 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-229ENST00000460826 SFT2D3Q587I9 215 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 DCAF10Q5QP82 559 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 GALNT18Q6P9A2 607 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 BORAQ6PGQ7 559 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 PCSK4Q6UW60 755 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 APOBEC4Q8WW27 367 aaKnown RBP13.13□□□□□ -0.31
HDLBP-229ENST00000460826 ZNF700Q9H0M5 742 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 ING2Q9H160 280 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 RPF2Q9H7B2 306 aaKnown RBP13.13□□□□□ -0.31
HDLBP-229ENST00000460826 LRTM1Q9HBL6 345 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 ZNF160Q9HCG1 818 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 INTS9Q9NV88 658 aaKnown RBP13.13□□□□□ -0.31
HDLBP-229ENST00000460826 C1orf109Q9NX04 203 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 MS4A12Q9NXJ0 267 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 DLGAP4Q9Y2H0 992 aa13.13□□□□□ -0.31
HDLBP-229ENST00000460826 ATP6AP2A0A1C7CYW4 349 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 A0A1W2PS29 197 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 A8MUA0 341 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 CLDN4O14493 209 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 ATP6AP2O75787 350 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 SNUPNO95149 360 aaKnown RBP13.12□□□□□ -0.31
HDLBP-229ENST00000460826 HPP00738 406 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 ITGB2P05107 769 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 IL3P08700 152 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 ANXA4P09525 319 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-229ENST00000460826 BUD31P41223 144 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-229ENST00000460826 OR4D2P58180 307 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 TAS2R50P59544 299 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 RPL38P63173 70 aaKnown RBP13.12□□□□□ -0.31
HDLBP-229ENST00000460826 RHDQ02161 417 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 GALNTL6Q49A17 601 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 NDUFAF5Q5TEU4 345 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 NOXRED1Q6NXP6 359 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 NDUFAF7Q7L592 441 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 APLFQ8IW19 511 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-229ENST00000460826 PARP9Q8IXQ6 854 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 TMEM102Q8N9M5 508 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-229ENST00000460826 C16orf78Q8WTQ4 265 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 CKAP2Q8WWK9 683 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 FCRL1Q96LA6 429 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 PPP1R36Q96LQ0 422 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 IMMP1LQ96LU5 166 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 C5AR2Q9P296 337 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 HEY2Q9UBP5 337 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 MARCOQ9UEW3 520 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-229ENST00000460826 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-229ENST00000460826 PCDHA9Q9Y5H5 950 aa13.12□□□□□ -0.31
HDLBP-229ENST00000460826 NSG1A0A0A6YYJ2 146 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 GNG14A0A1W2PPG7 69 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 BLACEA4D250 179 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 PCDH17O14917 1159 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 PEX11AO75192 247 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 KITP10721 976 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 TACR1P25103 407 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 TLX1P31314 330 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-229ENST00000460826 CCL11P51671 97 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 HK2P52789 917 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 RRADP55042 308 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 POLE2P56282 527 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 TRA2BP62995 288 aaKnown RBP13.11□□□□□ -0.31
HDLBP-229ENST00000460826 IGLV3-21P80748 117 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-229ENST00000460826 FOLH1Q04609 750 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 RFTN2Q52LD8 501 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-229ENST00000460826 HSP90B2PQ58FF3 399 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 OR52E8Q6IFG1 317 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 PAPD4Q6PIY7 484 aaKnown RBP13.11□□□□□ -0.31
HDLBP-229ENST00000460826 EXD3Q8N9H8 876 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDLBP-229ENST00000460826 DNAJB14Q8TBM8 379 aa13.11□□□□□ -0.31
HDLBP-229ENST00000460826 LRRC8CQ8TDW0 803 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms