RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 TEX35Q5T0J7 233 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 LYPLAL1Q5VWZ2 237 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 ALKBH5Q6P6C2 394 aaKnown RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 LCLAT1Q6UWP7 414 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 GDPGP1Q6ZNW5 385 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 CARM1Q86X55 608 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 CACUL1Q86Y37 369 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 STHQ8IWL8 128 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 OR4N5Q8IXE1 308 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 ELMOD1Q8N336 334 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 LIPHQ8WWY8 451 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 ATXN7L3BQ96GX2 97 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 S1PR3Q99500 378 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 LGMNQ99538 433 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 UBAC1Q9BSL1 405 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 PINK1Q9BXM7 581 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 GFRA4Q9GZZ7 299 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 UPF3AQ9H1J1 476 aaKnown RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 S100A14Q9HCY8 104 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 IL1RAPQ9NPH3 570 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 NLGN3Q9NZ94 848 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 ZNF319Q9P2F9 582 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 THEGQ9P2T0 379 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 ERVK-19Q9WJR5 959 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 KNSTRNQ9Y448 316 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 PLA2R1Q13018 1463 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 ZFYVE16Q7Z3T8 1539 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 ARHGEF12Q9NZN5 1544 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 RNF17Q9BXT8 1623 aaKnown RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 TCP10L2B9ZVM9 353 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 H7C423 109 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 SLC28A1O00337 649 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 TRAFD1O14545 582 aaPredicted RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 PSMD3O43242 534 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 DCXO43602 365 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 CSDE1O75534 798 aaKnown RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 CHRNGP07510 517 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 MMP10P09238 476 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 ZNF883P0CG24 379 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 RNF224P0DH78 156 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 CT45A8P0DMV1 189 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 CT45A9P0DMV2 189 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 CPA3P15088 417 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 DPEP1P16444 411 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 UGT1A6P19224 532 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 ABCE1P61221 599 aaKnown RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 RIGQ13278 110 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 KIAA0141Q14154 515 aaPredicted RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 GIT2Q14161 759 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 MLF2Q15773 248 aaPredicted RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 STX1AQ16623 288 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 UPP1Q16831 310 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 C2CD6Q53TS8 623 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 CT45A2Q5DJT8 189 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 SNRNP48Q6IEG0 339 aaKnown RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 CAPN13Q6MZZ7 669 aaPredicted RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 FAAP20Q6NZ36 180 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 TRIM65Q6PJ69 517 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 B3GLCTQ6Y288 498 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 METTL4Q8N3J2 472 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 FBXW8Q8N3Y1 598 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 RTL3Q8N8U3 475 aaKnown RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 Q8NBF4 154 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 PSMA8Q8TAA3 256 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 MGARPQ8TDB4 240 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 GANCQ8TET4 914 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 CFAP36Q96G28 342 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 C18orf12Q96KH6 178 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 ZNF599Q96NL3 588 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 AGAP4Q96P64 663 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 GAL3ST4Q96RP7 486 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 PKP2Q99959 881 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 KCNMB3Q9NPA1 279 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 PLEK2Q9NYT0 353 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 TRMT6Q9UJA5 497 aaKnown RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 OR1A2Q9Y585 309 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 ZHX2Q9Y6X8 837 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 DHX29Q7Z478 1369 aaKnown RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 JCADQ9P266 1359 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 DENND4BO75064 1496 aaPredicted RBP2.81□□□□□ -1.96
RFC4-211ENST00000460408 MAGI2Q86UL8 1455 aa2.81□□□□□ -1.96
RFC4-211ENST00000460408 NHSL1Q5SYE7 1610 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 CCDC88BA6NC98 1476 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 WRNQ14191 1432 aaPredicted RBP eCLIP2.8□□□□□ -1.96
RFC4-211ENST00000460408 IGHV4-30-2A0A087WSY4 118 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.8□□□□□ -1.96
RFC4-211ENST00000460408 TLR4O00206 839 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 CCSO14618 274 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 TFECO14948 347 aaPredicted RBP2.8□□□□□ -1.96
RFC4-211ENST00000460408 IDH3BO43837 385 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 GAS8O95995 478 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 MT-ND3P03897 115 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 ABHD2P08910 425 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 AOC1P19801 751 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 GPX3P22352 226 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 FHITP49789 147 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 CRYBA2P53672 197 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 ERVK11-1P61568 191 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms