RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 SYVN1Q86TM6 617 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 ANKRD46Q86W74 232 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 SLC37A3Q8NCC5 494 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 TRIM43Q96BQ3 446 aaPredicted RBP10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 RBP7Q96R05 134 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 TSNAXQ99598 290 aaKnown RBP10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 PCDHB16Q9NRJ7 776 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 UBQLN2Q9UHD9 624 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 SPARCP09486 303 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 SRCP12931 536 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 ANXA8P13928 327 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 GSTM2P28161 218 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 CD38P28907 300 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 SPINT3P49223 89 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 POU6F2P78424 691 aaPredicted RBP10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 TBRG1Q3YBR2 411 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 OR52E8Q6IFG1 317 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 GOLGA7Q7Z5G4 137 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 LAPTM4BQ86VI4 370 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 EDAQ92838 391 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 TOE1Q96GM8 510 aaKnown RBP10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 COL21A1Q96P44 957 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 ASB6Q9NWX5 421 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 A0A1W2PPW3 197 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 E2F3O00716 465 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 APOC3P02656 99 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 FGF3P11487 239 aaPredicted RBP10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 CD70P32970 193 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 RORCP51449 518 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 CDH12P55289 794 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 DUOXA1Q1HG43 343 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 NAPRTQ6XQN6 538 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 CDHR3Q6ZTQ4 885 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 TP53INP2Q8IXH6 220 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 GEMIN6Q8WXD5 167 aaKnown RBP10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 BMFQ96LC9 184 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 DCSTAMPQ9H295 470 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 MTMR10Q9NXD2 777 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 GPRC5BQ9NZH0 403 aa10.3□□□□□ -0.76
AMBRA1-202ENST00000458649 POLR1CO15160 346 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 RRP8O43159 456 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 CD36P16671 472 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 LEPRP48357 1165 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 CBLBQ13191 982 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 TLR1Q15399 786 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 LPAL2Q16609 132 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 SHQ1Q6PI26 577 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 PNLDC1Q8NA58 520 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 CCDC54Q8NEL0 328 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 GATAD2BQ8WXI9 593 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 TSACCQ96A04 125 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 TUBA1CQ9BQE3 449 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 IFT52Q9Y366 437 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 C1orf226A1L170 272 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 CLCA1A8K7I4 914 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 ZNF3P17036 446 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 PVALBP20472 110 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 TGFBIQ15582 683 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 SYNPOQ8N3V7 929 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 CDK15Q96Q40 435 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 NAA11Q9BSU3 229 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 PHF7Q9BWX1 381 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 ZNF350Q9GZX5 532 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 NKX1-2Q9UD57 310 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 U3KQV3 271 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 DDX60LQ5H9U9 1706 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 LINC01553A4QN01 128 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 SLC2A2P11168 524 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 MYCLP1P12525 358 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 STOMP27105 288 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 GKP32189 559 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 PLCXD2Q0VAA5 305 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 ST3GAL3Q11203 375 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 MERTKQ12866 999 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 KLHL22Q53GT1 634 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 UBALD2Q8IYN6 164 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 ANKFN1Q8N957 763 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 INO80EQ8NBZ0 244 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 OR52E4Q8NGH9 312 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 OR10A6Q8NH74 314 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 HSPA12BQ96MM6 686 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 LRRC3Q9BY71 257 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 PAQR5Q9NXK6 330 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 PPP4R1LQ9P1A2 415 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 FAM149AA5PLN7 773 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 LOC730098B7Z3J9 87 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 H7BY64 318 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 BCAT2O15382 392 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 GSTT2P0CG29 244 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 GSTT2BP0CG30 244 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 ZNF20P17024 532 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 EEFSECP57772 596 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 DNAJB13P59910 316 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 RPS13P62277 151 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 MXD1Q05195 221 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 MADCAM1Q13477 382 aa10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 RBM48Q5RL73 367 aaKnown RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 OGFRL1Q5TC84 451 aaPredicted RBP10.29□□□□□ -0.76
AMBRA1-202ENST00000458649 USP53Q70EK8 1073 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms