RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PPP2R2AP63151 447 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 TGM3Q08188 693 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 STX4Q12846 297 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 SLC10A1Q14973 349 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 TGFBIQ15582 683 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 TSNQ15631 228 aaKnown RBP9.63□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF791Q3KP31 576 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-227ENST00000458564 FBXL19-AS1Q494R0 122 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 CDKL4Q5MAI5 379 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 PRAMEF9Q5VWM5 478 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 FRA10AC1Q70Z53 315 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 ZZZ3Q8IYH5 903 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 PDIK1LQ8N165 341 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 FBXW8Q8N3Y1 598 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF321PQ8N8H1 164 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 PAQR8Q8TEZ7 354 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF721Q8TF20 911 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 MBD6Q96DN6 1003 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 RMND5BQ96G75 393 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-227ENST00000458564 KCNC2Q96PR1 638 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 GPATCH1Q9BRR8 931 aaKnown RBP9.63□□□□□ -0.87
HDLBP-227ENST00000458564 OR8D2Q9GZM6 311 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 ROGDIQ9GZN7 287 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 COPS7BQ9H9Q2 264 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-227ENST00000458564 POPDC3Q9HBV1 291 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 PRDM7Q9NQW5 492 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 QPCTLQ9NXS2 382 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 TUBA8Q9NY65 449 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-227ENST00000458564 SPRR3Q9UBC9 169 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 COPS7AQ9UBW8 275 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 ASIC3Q9UHC3 531 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 ACAD8Q9UKU7 415 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 EDARQ9UNE0 448 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 PPP2R2CQ9Y2T4 447 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 PSAT1Q9Y617 370 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 TEX264Q9Y6I9 313 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 FAM95CA0A1B0GW59 222 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ATP6AP2A0A1C7CYW4 349 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 HSPB2A8KAH6 182 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 SYT5O00445 386 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 CES2O00748 559 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ATP6AP2O75787 350 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 WISP3O95389 354 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ETHE1O95571 254 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 IGKV3-11P04433 115 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ELK3P41970 407 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 KIR2DL3P43628 341 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 TAS2R39P59534 338 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 IGLV3-21P80748 117 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ILF2Q12905 390 aaKnown RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 FOXD4Q12950 439 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 E2F2Q14209 437 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF460Q14592 562 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 MORF4L2Q15014 288 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 CEBPEQ15744 281 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 HSPB2Q16082 182 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 C18orf21Q32NC0 220 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 PIGGQ5H8A4 983 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ADNP2Q6IQ32 1131 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 LYPD8Q6UX82 237 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF793Q6ZN11 406 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 WDR53Q7Z5U6 358 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 DND1Q8IYX4 353 aaKnown RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 LRRC25Q8N386 305 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 TCAIMQ8N3R3 496 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 SLC15A4Q8N697 577 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 SRFBP1Q8NEF9 429 aaKnown RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ANKRD49Q8WVL7 239 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 SPACA9Q96E40 222 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 PTCD3Q96EY7 689 aaKnown RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 CFAP36Q96G28 342 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 SH3GL2Q99962 352 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 TMEM79Q9BSE2 394 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 MCMBPQ9BTE3 642 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 EFCAB11Q9BUY7 163 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 DERL2Q9GZP9 239 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 LIME1Q9H400 295 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 LDAHQ9H6V9 325 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 CNOT10Q9H9A5 744 aaKnown RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ACKR4Q9NPB9 350 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 SEMA4BQ9NPR2 832 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 DNAJC11Q9NVH1 559 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 CRIM1Q9NZV1 1036 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 CTNNAL1Q9UBT7 734 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF490Q9ULM2 529 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 BOKQ9UMX3 212 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 CHMP2BQ9UQN3 213 aa9.62□□□□□ -0.87
HDLBP-227ENST00000458564 RPH3AQ9Y2J0 694 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.62□□□□□ -0.87
HDLBP-227ENST00000458564 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-227ENST00000458564 LRRC3CA6NJW4 275 aa9.61□□□□□ -0.87
HDLBP-227ENST00000458564 A6NNC1 897 aa9.61□□□□□ -0.87
HDLBP-227ENST00000458564 TAPBPO15533 448 aa9.61□□□□□ -0.87
HDLBP-227ENST00000458564 PROM1O43490 865 aa9.61□□□□□ -0.87
HDLBP-227ENST00000458564 LDB3O75112 727 aa9.61□□□□□ -0.87
HDLBP-227ENST00000458564 COX7A2P14406 83 aa9.61□□□□□ -0.87
HDLBP-227ENST00000458564 CD22P20273 847 aa9.61□□□□□ -0.87
HDLBP-227ENST00000458564 DNASE1P24855 282 aa9.61□□□□□ -0.87
HDLBP-227ENST00000458564 ATP5A1P25705 553 aaKnown RBP9.61□□□□□ -0.87
HDLBP-227ENST00000458564 PIGAP37287 484 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms