RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CCDC166P0CW27 439 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 CASP2P42575 452 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 ZNF750Q32MQ0 723 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 CHSY3Q70JA7 882 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 RPRMLQ8N4K4 120 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 PDPRQ8NCN5 879 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 OR10Q1Q8NGQ4 319 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 CDKL2Q92772 493 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 SARAFQ96BY9 339 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 TTYH2Q9BSA4 534 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 PNPLA3Q9NST1 481 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 CD274Q9NZQ7 290 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 PTBP2Q9UKA9 531 aaKnown RBP19.93■□□□□ 0.78
CPNE1-220ENST00000458038 AKAP6Q13023 2319 aa19.93■□□□□ 0.78
CPNE1-220ENST00000458038 KLK8O60259 260 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 PRAMEF4O60810 478 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 SCELO95171 688 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 ATP5A1P25705 553 aaKnown RBP19.92■□□□□ 0.78
CPNE1-220ENST00000458038 SERPINB1P30740 379 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 ZFP36L2P47974 494 aaKnown RBP19.92■□□□□ 0.78
CPNE1-220ENST00000458038 HSPA7P48741 367 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 IRF8Q02556 426 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 E2F2Q14209 437 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 AP5B1Q2VPB7 878 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 PIGGQ5H8A4 983 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 PRAMEF9Q5VWM5 478 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 CYS1Q717R9 158 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 SLC15A4Q8N697 577 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 TMEM251Q8N6I4 163 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 ACOT4Q8N9L9 421 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 BBOF1Q8ND07 529 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 OR5M9Q8NGP3 310 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 NUBPLQ8TB37 319 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 MS4A12Q9NXJ0 267 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 ACAD8Q9UKU7 415 aa19.92■□□□□ 0.78
CPNE1-220ENST00000458038 MTO1Q9Y2Z2 717 aaKnown RBP19.92■□□□□ 0.78
CPNE1-220ENST00000458038 A0A0G2JMM0 328 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 A0A1W2PPB8 328 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 A0A1W2PRS3 328 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 KIR3DP1A8MWS1 328 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 TP73O15350 636 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 HCN1O60741 890 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 LDB3O75112 727 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 S100BP04271 92 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-220ENST00000458038 STMN1P16949 149 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 MAGEA5P43359 124 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 MAN2A2P49641 1150 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 FOXO1Q12778 655 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 CHIT1Q13231 466 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 FASTKD3Q14CZ7 662 aaKnown RBP19.91■□□□□ 0.78
CPNE1-220ENST00000458038 WLSQ5T9L3 541 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 ZNF585AQ6P3V2 769 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 DND1Q8IYX4 353 aaKnown RBP19.91■□□□□ 0.78
CPNE1-220ENST00000458038 ZBED8Q8IZ13 594 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 PYROXD1Q8WU10 500 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 ART5Q96L15 291 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 CPNE1Q99829 537 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 MAPKAP1Q9BPZ7 522 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 MS4A8Q9BY19 250 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 PHACTR1Q9C0D0 580 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 LDAHQ9H6V9 325 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 IGSF5Q9NSI5 407 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.91■□□□□ 0.789e-7■□□□□ 11
CPNE1-220ENST00000458038 ADGRE2Q9UHX3 823 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 PCDHGB3Q9Y5G1 929 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 NINQ8N4C6 2090 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 NIPBLQ6KC79 2804 aaeCLIP19.91■□□□□ 0.781e-8■□□□□ 10.5
CPNE1-220ENST00000458038 ABCA4P78363 2273 aa19.91■□□□□ 0.78
CPNE1-220ENST00000458038 EFCAB8A8MWE9 144 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 GLI4P10075 376 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 GABRA1P14867 456 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 CD1DP15813 335 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 HIST1H1TP22492 207 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-220ENST00000458038 PEX19P40855 299 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 MSH2P43246 934 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 IGLV3-21P80748 117 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-220ENST00000458038 PCDH1Q08174 1060 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 MYBPHQ13203 477 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 SLC25A35Q3KQZ1 300 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 SLC22A10Q63ZE4 541 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 LRRC70Q7Z2Q7 622 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 UBE3DQ7Z6J8 389 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 TMEM200AQ86VY9 491 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 CREG2Q8IUH2 290 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 SLC22A8Q8TCC7 542 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 ZNF721Q8TF20 911 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 ZNF473Q8WTR7 871 aaKnown RBP19.9■□□□□ 0.78
CPNE1-220ENST00000458038 ANKRD9Q96BM1 317 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-220ENST00000458038 CMTM7Q96FZ5 175 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 RBM18Q96H35 190 aaKnown RBP19.9■□□□□ 0.78
CPNE1-220ENST00000458038 UBXN10Q96LJ8 280 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 GPR22Q99680 433 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 CD244Q9BZW8 370 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 RNF112Q9ULX5 631 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 ATG4BQ9Y4P1 393 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 ARHGAP21Q5T5U3 1957 aa19.9■□□□□ 0.78
CPNE1-220ENST00000458038 G3V3Y1 287 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 CCNT2O60583 730 aaKnown RBP19.89■□□□□ 0.77
CPNE1-220ENST00000458038 ZWINTO95229 277 aa19.89■□□□□ 0.77
CPNE1-220ENST00000458038 CD22P20273 847 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms