RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 MLXIPLQ9NP71 852 aa9.46□□□□□ -0.9
RFX3-210ENST00000457373 PNO1Q9NRX1 252 aaKnown RBP9.46□□□□□ -0.9
RFX3-210ENST00000457373 PPT2Q9UMR5 302 aa9.46□□□□□ -0.9
RFX3-210ENST00000457373 FIS1Q9Y3D6 152 aa9.46□□□□□ -0.9
RFX3-210ENST00000457373 ZNF451Q9Y4E5 1061 aa9.46□□□□□ -0.9
RFX3-210ENST00000457373 MMACHCQ9Y4U1 282 aa9.46□□□□□ -0.9
RFX3-210ENST00000457373 EPG5Q9HCE0 2579 aa9.46□□□□□ -0.9
RFX3-210ENST00000457373 FREM2Q5SZK8 3169 aa9.46□□□□□ -0.9
RFX3-210ENST00000457373 A0A0A6YYD5 115 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 TCRBV16S1A1N1A0A5B0 115 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ARHGAP10A1A4S6 786 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 GOLGA6L10A6NI86 522 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 A8MUI8 341 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 TGFBR3LH3BV60 316 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 TMPRSS11DO60235 418 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 KLHL41O60662 606 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 CTNSO60931 367 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 PRKRAO75569 313 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 SERPINA7P05543 415 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 KLK1P06870 262 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 BPGMP07738 259 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 FAM58BPP0C7Q3 252 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 PRR35P0CG20 571 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ITGAMP11215 1152 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ICAM2P13598 275 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 TNNI3P19429 210 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 HSD17B7P56937 341 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 HMGCS1Q01581 520 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ID2Q02363 134 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 C19orf57Q0VDD7 668 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 STX4Q12846 297 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 CSTF3Q12996 717 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 TNFAIP8L3Q5GJ75 292 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 CCNYL2Q5T2Q4 361 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 C10orf62Q5T681 223 aaPredicted RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 C18orf63Q68DL7 685 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 MRM1Q6IN84 353 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 LINC00696Q6ZRV3 163 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 CUZD1Q86UP6 607 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 NUDCD3Q8IVD9 361 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 SCUBE1Q8IWY4 988 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 OR4N5Q8IXE1 308 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ZCCHC7Q8N3Z6 543 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 C1orf52Q8N6N3 182 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 SIRT6Q8N6T7 355 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 TEX19Q8NA77 164 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 PPP1R14CQ8TAE6 165 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 BRIX1Q8TDN6 353 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 UCN3Q969E3 161 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 PKNOX2Q96KN3 472 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 SMAD5Q99717 465 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 PAIP2Q9BPZ3 127 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 WDR77Q9BQA1 342 aaPredicted RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 ALOXE3Q9BYJ1 711 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 STMN4Q9H169 189 aaPredicted RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 DDX31Q9H8H2 851 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 BRF2Q9HAW0 419 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 KCNK13Q9HB14 408 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 TMBIM4Q9HC24 238 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ZBTB20Q9HC78 741 aaPredicted RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 SSU72Q9NP77 194 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 TNFRSF12AQ9NP84 129 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ARGLU1Q9NWB6 273 aaPredicted RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 NMRK1Q9NWW6 199 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 LYARQ9NX58 379 aaKnown RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 MS4A12Q9NXJ0 267 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 PTGFRNQ9P2B2 879 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 VPS29Q9UBQ0 182 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 PHF11Q9UIL8 331 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ZNF232Q9UNY5 417 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 ATG4BQ9Y4P1 393 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 PCDHGB7Q9Y5F8 929 aa9.45□□□□□ -0.9
RFX3-210ENST00000457373 HEMK1Q9Y5R4 338 aaPredicted RBP9.45□□□□□ -0.9
RFX3-210ENST00000457373 IGKV3D-11A0A0A0MRZ8 115 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 A0A1W2PQ72 361 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 WASHC1A8K0Z3 465 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 B8ZZF3 427 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 H3BQF6 201 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 AZIN1O14977 448 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 PROM1O43490 865 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 NPHS1O60500 1241 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 SEMA3DO95025 777 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 IFNA16P05015 189 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 CHRNGP07510 517 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 UROSP10746 265 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 NEFHP12036 1026 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 HSD3B1P14060 373 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 HSD3B2P26439 372 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 TPP2P29144 1249 aaPredicted RBP9.44□□□□□ -0.9
RFX3-210ENST00000457373 PPP2R1BP30154 601 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 TLX1P31314 330 aaPredicted RBP9.44□□□□□ -0.9
RFX3-210ENST00000457373 BUD31P41223 144 aaPredicted RBP9.44□□□□□ -0.9
RFX3-210ENST00000457373 ETV4P43268 484 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 SLC26A5P58743 744 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 TNFRSF17Q02223 184 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 TBL3Q12788 808 aaKnown RBP9.44□□□□□ -0.9
RFX3-210ENST00000457373 KLRB1Q12918 225 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 IMPG1Q17R60 797 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 SPDYAQ5MJ70 313 aa9.44□□□□□ -0.9
RFX3-210ENST00000457373 VWA5B1Q5TIE3 1220 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms