RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 KCNJ3P48549 501 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 HOXA1P49639 335 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 NKX2-5P52952 324 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 CDH15P55291 814 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 TAS2R60P59551 318 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 DCDC1P59894 354 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 IL9RQ01113 521 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 FLI1Q01543 452 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 SLC3A1Q07837 685 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ILF3Q12906 894 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS41-209ENST00000457055 MRPL49Q13405 166 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 ENPP2Q13822 863 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 TMED2Q15363 201 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ZNHIT3Q15649 155 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 SLC18A3Q16572 532 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 LRRC36Q1X8D7 754 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 EIF2S3LQ2VIR3 472 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 CHRFAM7AQ494W8 412 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 KLHL12Q53G59 568 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ACTBL2Q562R1 376 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 DDI2Q5TDH0 399 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 PRAMEF8Q5VWM4 474 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 FAM91A1Q658Y4 838 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 OR5M10Q6IEU7 315 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 BHLHB9Q6PI77 547 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 PRSS57Q6UWY2 283 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 ZBTB49Q6ZSB9 765 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 SLC35D2Q76EJ3 337 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 GSTA5Q7RTV2 222 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 GDF7Q7Z4P5 450 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 SNX20Q7Z614 316 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 PAQR7Q86WK9 346 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 KMT5CQ86Y97 462 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 CROCCP3Q8IVE0 287 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 MICU2Q8IYU8 434 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 RCOR2Q8IZ40 523 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 CMTM4Q8IZR5 234 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 TMEM104Q8NE00 496 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 OR7D4Q8NG98 312 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 OR10H4Q8NGA5 316 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 OR56B1Q8NGI3 324 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 SLC35F5Q8WV83 523 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 OIT3Q8WWZ8 545 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ST8SIA2Q92186 375 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 CPNE4Q96A23 557 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 MIB2Q96AX9 1013 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ULK4Q96C45 1275 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 CCDC124Q96CT7 223 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 PTCD3Q96EY7 689 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 RRNAD1Q96FB5 475 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 PRR11Q96HE9 360 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 CAPNS2Q96L46 248 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 RNF145Q96MT1 663 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 BTBD9Q96Q07 612 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 TRIB1Q96RU8 372 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 EGFL8Q99944 293 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 TMEM246Q9BRR3 403 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 MLST8Q9BVC4 326 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 HINT2Q9BX68 163 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 RAB1BQ9H0U4 201 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 PCDHAC1Q9H158 963 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ALX4Q9H161 411 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 GANQ9H2C0 597 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 MTG2Q9H4K7 406 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 GEMIN7Q9H840 131 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 MARCH7Q9H992 704 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 MEAF6Q9HAF1 191 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 EBF2Q9HAK2 575 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 SEMA4BQ9NPR2 832 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 XPNPEP1Q9NQW7 623 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 TAS2R1Q9NYW7 299 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 GPRC5DQ9NZD1 345 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 SCOCQ9UIL1 159 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 MKLN1Q9UL63 735 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 MGAT4BQ9UQ53 548 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 NIP7Q9Y221 180 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS41-209ENST00000457055 KCNK6Q9Y257 313 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 EXOGQ9Y2C4 368 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 ARL2BPQ9Y2Y0 163 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 COL6A3P12111 3177 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 NRCAMQ92823 1304 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ANKRD36BQ8N2N9 1353 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 RAB3GAP2Q9H2M9 1393 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 LTN1O94822 1766 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 MAP2P11137 1827 aaKnown RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 SLIT3O75094 1523 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 A0A087WV48 116 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 A0A087WZ62 844 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 C13orf42A0A1B0GVH6 325 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ESYT2A0FGR8 921 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 C17orf102A2RUQ5 167 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ANKRD61A6NGH8 418 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 OR2AT4A6NND4 320 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ARHGEF33A8MVX0 844 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 A8MZ25 164 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 F8VP50 259 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PRAMEF26H0Y7S4 382 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 WWP2O00308 870 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms