RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ATP6V1E2Q96A05 226 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 TRIM44Q96DX7 344 aaPredicted RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 MTBPQ96DY7 904 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 MAGED4Q96JG8 741 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 MTERF1Q99551 399 aaKnown RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 MRPL57Q9BQC6 102 aaKnown RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 NTMT1Q9BV86 223 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 MRPL46Q9H2W6 279 aaKnown RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 RYDENQ9NUL5 291 aaKnown RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 LYARQ9NX58 379 aaKnown RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 COPS7AQ9UBW8 275 aa16.64■□□□□ 0.25
MSH6-207ENST00000456246 ZNF223Q9UK11 482 aaPredicted RBP16.64■□□□□ 0.25
MSH6-207ENST00000456246 TRIM49D1C9J1S8 452 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 KLRC4-KLRK1H3BQV0 150 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 SAP18O00422 153 aaKnown RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 PLPP1O14494 284 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 SIX3O95343 332 aaPredicted RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 CLDN1O95832 211 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 ZNF24P17028 368 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 TNNI3P19429 210 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 ARL1P40616 181 aaPredicted RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 CA7P43166 264 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 SSR4P51571 173 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 CCNG1P51959 295 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 RPS13P62277 151 aaKnown RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 IGLV3-21P80748 117 aaPredicted RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 TNFRSF17Q02223 184 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 ZRSR2Q15696 482 aaKnown RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 C1QL3Q5VWW1 255 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 LCA5Q86VQ0 697 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 OR5L2Q8NGL0 311 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 PTPMT1Q8WUK0 201 aaPredicted RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 TANKQ92844 425 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 ART5Q96L15 291 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 SERPINI1Q99574 410 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 PELOQ9BRX2 385 aaKnown RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 RPF2Q9H7B2 306 aaKnown RBP16.63■□□□□ 0.25
MSH6-207ENST00000456246 MYOTQ9UBF9 498 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 NFU1Q9UMS0 254 aa16.63■□□□□ 0.25
MSH6-207ENST00000456246 TRGV8A0A0C4DH27 118 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 LRRC14BA6NHZ5 514 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 C17orf105B2RV13 164 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 SLC19A2O60779 497 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 LDB3O75112 727 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 SH3BGRLO75368 114 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 SEMA3DO95025 777 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 STT3AP46977 705 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 PLIN5Q00G26 463 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 RPTNQ6XPR3 784 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 BNC2Q6ZN30 1099 aaPredicted RBP16.62■□□□□ 0.25
MSH6-207ENST00000456246 ZNF227Q86WZ6 799 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 NUDT13Q86X67 352 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 GHDCQ8N2G8 530 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 WDR20Q8TBZ3 569 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 ANKRD9Q96BM1 317 aaPredicted RBP16.62■□□□□ 0.25
MSH6-207ENST00000456246 PHF21BQ96EK2 531 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 DGAT2Q96PD7 388 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 OR8D2Q9GZM6 311 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 NOL11Q9H8H0 719 aaKnown RBP16.62■□□□□ 0.25
MSH6-207ENST00000456246 DDX31Q9H8H2 851 aaKnown RBP16.62■□□□□ 0.25
MSH6-207ENST00000456246 WDR41Q9HAD4 459 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 TIMMDC1Q9NPL8 285 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 ZNF358Q9NW07 568 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 PCTPQ9UKL6 214 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 RNF11Q9Y3C5 154 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 NOTCH2Q04721 2471 aa16.62■□□□□ 0.25
MSH6-207ENST00000456246 A8MVJ9 347 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 NPIPA5E9PKD4 350 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 ST13P50502 369 aaKnown RBP16.61■□□□□ 0.25
MSH6-207ENST00000456246 SRSF11Q05519 484 aaKnown RBP16.61■□□□□ 0.25
MSH6-207ENST00000456246 IFT88Q13099 833 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 GGTA1PQ4G0N0 100 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 FRG2Q64ET8 278 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 CYP20A1Q6UW02 462 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 TIFABQ6ZNK6 161 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 SIAH3Q8IW03 269 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 UHMK1Q8TAS1 419 aaKnown RBP16.61■□□□□ 0.25
MSH6-207ENST00000456246 SLC2A12Q8TD20 617 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 ASB15Q8WXK1 588 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 RBM18Q96H35 190 aaKnown RBP16.61■□□□□ 0.25
MSH6-207ENST00000456246 FRG2BQ96QU4 278 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.61■□□□□ 0.25
MSH6-207ENST00000456246 HPF1Q9NWY4 346 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 FETUBQ9UGM5 382 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 NPIPA1Q9UND3 350 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 ERVK-11Q9UQG0 969 aa16.61■□□□□ 0.25
MSH6-207ENST00000456246 MYO7BQ6PIF6 2116 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 A0A0A6YYD5 115 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 OR7A17O14581 309 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 ASNA1O43681 348 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 FGF17O60258 216 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 ZG16O60844 167 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 OR2J2O76002 312 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 OTCP00480 354 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 RPS17P08708 135 aaKnown RBP16.6■□□□□ 0.25
MSH6-207ENST00000456246 TTC19Q6DKK2 380 aaPredicted RBP16.6■□□□□ 0.25
MSH6-207ENST00000456246 MRM1Q6IN84 353 aaKnown RBP16.6■□□□□ 0.25
MSH6-207ENST00000456246 Q6ZPB1 254 aaPredicted RBP16.6■□□□□ 0.25
MSH6-207ENST00000456246 ST13P4Q8IZP2 240 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms