RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ZNF776Q68DI1 518 aaPredicted RBP14.32□□□□□ -0.12
LDLR-202ENST00000455727 Q6ZNX1 250 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 P2RY8Q86VZ1 359 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 RNF217Q8TC41 542 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 MYDGFQ969H8 173 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 FAM131CQ96AQ9 280 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 PLEKHA8Q96JA3 519 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 GALNT8Q9NY28 637 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 EHD3Q9NZN3 535 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 SLC17A4Q9Y2C5 497 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 DGKBQ9Y6T7 804 aa14.32□□□□□ -0.12
LDLR-202ENST00000455727 A0A0A6YYD5 115 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 IGKV1-8A0A0C4DH67 115 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 OR2A25A4D2G3 310 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 PCDH17O14917 1159 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 CCNB2O95067 398 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 MFN2O95140 757 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 FADS2O95864 444 aaKnown RBP14.31□□□□□ -0.12
LDLR-202ENST00000455727 CEACAM5P06731 702 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 PKLRP30613 574 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 TNFRSF4P43489 277 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 SGCGQ13326 291 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 PUM1Q14671 1186 aaKnown RBP eCLIP14.31□□□□□ -0.12
LDLR-202ENST00000455727 FAM180BQ6P0A1 224 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 CCDC81Q6ZN84 652 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 Q6ZPB1 254 aaPredicted RBP14.31□□□□□ -0.12
LDLR-202ENST00000455727 AHSA2Q719I0 299 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 CACUL1Q86Y37 369 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 DNAJC22Q8N4W6 341 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 MIPOL1Q8TD10 442 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 PHF10Q8WUB8 498 aaKnown RBP14.31□□□□□ -0.12
LDLR-202ENST00000455727 ELSPBP1Q96BH3 223 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 VMP1Q96GC9 406 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 COPS4Q9BT78 406 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 CERS4Q9HA82 394 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 ZSCAN32Q9NX65 697 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 LRIT2A6NDA9 550 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 CLCA1A8K7I4 914 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 ZNF12P17014 697 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 GABRB1P18505 474 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 PSMB9P28065 219 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 MAGEA8P43361 318 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 ARFIP1P53367 373 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 MLLT10P55197 1068 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 ADPRMQ3LIE5 342 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 CYP27C1Q4G0S4 372 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 RASSF5Q8WWW0 418 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 TMEM19Q96HH6 336 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 ALPK1Q96QP1 1244 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 MAPKAP1Q9BPZ7 522 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 OSGEPL1Q9H4B0 414 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 MVB12BQ9H7P6 319 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 B3GNT3Q9Y2A9 372 aa14.31□□□□□ -0.12
LDLR-202ENST00000455727 NINQ8N4C6 2090 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 CLDN24A6NM45 220 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 HMGN4O00479 90 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 B4GALT2O60909 372 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 BCHEP06276 602 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 NR4A1P22736 598 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 CCT3P49368 545 aaKnown RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 ABATP80404 500 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 TBCEQ15813 527 aaPredicted RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 ZIC1Q15915 447 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 ANKDD1AQ495B1 522 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 SPDYE7PQ495Y7 208 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 COLEC12Q5KU26 742 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 ZNF770Q6IQ21 691 aaPredicted RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 TNFAIP8L2Q6P589 184 aaPredicted RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 TMEM184AQ6ZMB5 413 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 SLC15A4Q8N697 577 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 OR9Q2Q8NGE9 314 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 EXOSC8Q96B26 276 aaKnown RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 TEX10Q9NXF1 929 aaPredicted RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 AXIN1O15169 862 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 PLRG1O43660 514 aaKnown RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 PRICKLE3O43900 615 aaPredicted RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 MAN1A2O60476 641 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 CDK1P06493 297 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 GDI1P31150 447 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 KIR2DL1P43626 348 aaPredicted RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 RPS26P62854 115 aaKnown RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 HSPB3Q12988 150 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 EGFL6Q8IUX8 553 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 CCDC103Q8IW40 242 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 PROX1Q92786 737 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 PPP1R14BQ96C90 147 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 TEFMQ96QE5 360 aaKnown RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 SARGQ9BW04 601 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 C1QTNF7Q9BXJ2 289 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 SLC17A9Q9BYT1 436 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 IMP3Q9NV31 184 aaKnown RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 TBCCD1Q9NVR7 557 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 ZNF226Q9NYT6 803 aa14.3□□□□□ -0.12
LDLR-202ENST00000455727 YBX2Q9Y2T7 364 aaKnown RBP14.3□□□□□ -0.12
LDLR-202ENST00000455727 M0R3G1 203 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 GRK3P35626 688 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 OCA2Q04671 838 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 TMED1Q13445 227 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 MAPK11Q15759 364 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 UAP1L1Q3KQV9 507 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms