RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 PTGER1P34995 402 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 PEX19P40855 299 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 MTNR1BP49286 362 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 CDKN1CP49918 316 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 TAS2R40P59535 323 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 PLOD1Q02809 727 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 AP1B1Q10567 949 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 FOXF2Q12947 444 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 FASTKQ14296 549 aaKnown RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 DAZAP2Q15038 168 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 TAF1AQ15573 450 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 TAZQ16635 292 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 MEP1AQ16819 746 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 HADHQ16836 314 aaKnown RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 CMPK2Q5EBM0 449 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 SHEQ5VZ18 495 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 FCRLBQ6BAA4 426 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 ARSKQ6UWY0 536 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 RNF44Q7L0R7 432 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 SNX20Q7Z614 316 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 CRLF3Q8IUI8 442 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 LIX1LQ8IVB5 337 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 OR4N4Q8N0Y3 316 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 CIARTQ8N365 385 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 AFAP1L2Q8N4X5 818 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 SLC25A41Q8N5S1 370 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 CLDN19Q8N6F1 224 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 LMNTD1Q8N9Z9 388 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 ZFP62Q8NB50 900 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 POGLUT1Q8NBL1 392 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 TMEM178AQ8NBL3 297 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 KCTD6Q8NC69 237 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 MYRIPQ8NFW9 859 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 OR13C4Q8NGS5 318 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 OR2A1Q8NGT9 310 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 OR2L8Q8NGY9 312 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 HMGCLL1Q8TB92 370 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 ULK4Q96C45 1275 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 PTCD3Q96EY7 689 aaKnown RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 DCUN1D1Q96GG9 259 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 MARS2Q96GW9 593 aaKnown RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 ZNF830Q96NB3 372 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 UTP23Q9BRU9 249 aaKnown RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 KLK15Q9H2R5 256 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 TP63Q9H3D4 680 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 PLEKHF2Q9H8W4 249 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 VPS37BQ9H9H4 285 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 MMP25Q9NPA2 562 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 MKKSQ9NPJ1 570 aaPredicted RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 C14orf119Q9NWQ9 140 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 ANKRD10Q9NXR5 420 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 LRFN1Q9P244 771 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 SLC17A6Q9P2U8 582 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 LIMA1Q9UHB6 759 aaKnown RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 CRLS1Q9UJA2 301 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 GNPTGQ9UJJ9 305 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 ANAPC7Q9UJX3 599 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 PLAGL1Q9UM63 463 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 RUVBL1Q9Y265 456 aaKnown RBP3.44□□□□□ -1.86
RBM39-220ENST00000455343 HEY1Q9Y5J3 304 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 AKAP6Q13023 2319 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 DOCK10Q96BY6 2186 aa3.44□□□□□ -1.86
RBM39-220ENST00000455343 HIVEP2P31629 2446 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 CACNA1CQ13936 2221 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 IGHV3-20A0A0C4DH32 117 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 A0A0J9YVX5 310 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 OR2A25A4D2G3 310 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 CDHR4A6H8M9 788 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 LRRC3CA6NJW4 275 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 LRRC53A6NM62 1247 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 C2orf81A6NN90 581 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 GABRR3A8MPY1 467 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 INAFM1C9JVW0 142 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 SYT5O00445 386 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 RASGRF2O14827 1237 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 HS6ST1O60243 411 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 NME2P1O60361 137 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 PROP1O75360 226 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 CRLF1O75462 422 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 GPC4O75487 556 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 SLC25A12O75746 678 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 PROSCO94903 275 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 AMY1AP04745 511 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 TPM2P07951 284 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 C8orf89P0DMQ9 161 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 OSMP13725 252 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 CD53P19397 219 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 TFEBP19484 476 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ITGALP20701 1170 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 PSMA3P25788 255 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 PCSK6P29122 969 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ADRA1AP35348 466 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ARHGAP25P42331 645 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ZFP36L2P47974 494 aaKnown RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 NR0B1P51843 470 aaKnown RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 ZNF140P52738 457 aaPredicted RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 NUP107P57740 925 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 VSX2P58304 361 aaPredicted RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 UBE2HP62256 183 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 NKX6-1P78426 367 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms