RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 COL26A1Q96A83 441 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 NXPE2Q96DL1 559 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 MARK4Q96L34 752 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 TEX37Q96LM6 180 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 CSF3RQ99062 836 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 ZBTB18Q99592 522 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 PRPF18Q99633 342 aaKnown RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 BHLHE41Q9C0J9 482 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 RPF2Q9H7B2 306 aaKnown RBP10.6□□□□□ -0.71
TRAF4-206ENST00000454852 ATAD3AQ9NVI7 634 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 HCN3Q9P1Z3 774 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 TRPC4Q9UBN4 977 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 FBXW2Q9UKT8 454 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 PADI1Q9ULC6 663 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 CLDN16Q9Y5I7 305 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 CAPN7Q9Y6W3 813 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 SEC16AO15027 2179 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 CFAP54Q96N23 3096 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 SCN3AQ9NY46 2000 aa10.6□□□□□ -0.71
TRAF4-206ENST00000454852 IGKV3D-11A0A0A0MRZ8 115 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 STMND1H3BQB6 276 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 AGRPO00253 132 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 CLDN4O14493 209 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 TERTO14746 1132 aaKnown RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 PCDH17O14917 1159 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 SCN2BO60939 215 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 IFI6P09912 130 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 PIK3R1P27986 724 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 ID4P47928 161 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 POLR2JP52435 117 aaKnown RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 HNRNPFP52597 415 aaKnown RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 PCBP4P57723 403 aaKnown RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 MC1RQ01726 317 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 KRT72Q14CN4 511 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 MLC1Q15049 377 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 MAPRE2Q15555 327 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 NKG7Q16617 165 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 SYT16Q17RD7 645 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 CPTPQ5TA50 214 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 C6orf89Q6UWU4 347 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 MARCH9Q86YJ5 346 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 TICAM1Q8IUC6 712 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 NLGN4XQ8N0W4 816 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 METTL27Q8N6F8 245 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 FAM47BQ8NA70 645 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 GALNT6Q8NCL4 622 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 TMEM52Q8NDY8 209 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 PLPP5Q8NEB5 264 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 NLGN4YQ8NFZ3 816 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 OR9I1Q8NGQ6 314 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 CLHC1Q8NHS4 586 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 RP9Q8TA86 221 aaKnown RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 STT3BQ8TCJ2 826 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 PPCDCQ96CD2 204 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 PEX11GQ96HA9 241 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 ZNF681Q96N22 645 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 ZNF578Q96N58 590 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 SPSB2Q99619 263 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 MIEF1Q9NQG6 463 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 THSD1Q9NS62 852 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 ACSS1Q9NUB1 689 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 FAM120CQ9NX05 1096 aaKnown RBP10.59□□□□□ -0.71
TRAF4-206ENST00000454852 PSME2Q9UL46 239 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 MSRB2Q9Y3D2 182 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 MAU2Q9Y6X3 613 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 SDK2Q58EX2 2172 aa10.59□□□□□ -0.71
TRAF4-206ENST00000454852 A0A1W2PP18 115 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 MYO1GB0I1T2 1018 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 C21orf140B9A014 251 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 C9J4A7 227 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 RNASET2O00584 256 aaKnown RBP10.58□□□□□ -0.72
TRAF4-206ENST00000454852 PGRMC2O15173 223 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 CNOT3O75175 753 aaKnown RBP10.58□□□□□ -0.72
TRAF4-206ENST00000454852 LRATO95237 230 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 GPR75O95800 540 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 RECKO95980 971 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 PGRP06401 933 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 ZGLP1P0C6A0 271 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 COX7A2P14406 83 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 GALNSP34059 522 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 STAT5AP42229 794 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 KIR3DL1P43629 444 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 WNT3P56703 355 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 RHAGQ02094 409 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 OCA2Q04671 838 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 ACTN3Q08043 901 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-206ENST00000454852 NCF4Q15080 339 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 MPEG1Q2M385 716 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 AGKQ53H12 422 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 SPANXN4Q5MJ08 99 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 ANXA8L1Q5VT79 327 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 LCN10Q6JVE6 187 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 FOXR1Q6PIV2 292 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 TRPM8Q7Z2W7 1104 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 TREML1Q86YW5 311 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 SHISA5Q8N114 240 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 PSMA8Q8TAA3 256 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 MR1Q95460 341 aa10.58□□□□□ -0.72
TRAF4-206ENST00000454852 NACC2Q96BF6 587 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms