RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FOXA1P55317 472 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 AP2B1P63010 937 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 CSTF3Q12996 717 aaKnown RBP18.69■□□□□ 0.58
COL9A3-202ENST00000452372 SLC13A2Q13183 592 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 NADK2Q4G0N4 442 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 PLAG1Q6DJT9 500 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 PAPD4Q6PIY7 484 aaKnown RBP18.69■□□□□ 0.58
COL9A3-202ENST00000452372 CYP20A1Q6UW02 462 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 PAGE2Q7Z2X7 111 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 HBEGFQ99075 208 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 STMN4Q9H169 189 aaPredicted RBP18.69■□□□□ 0.58
COL9A3-202ENST00000452372 VPS29Q9UBQ0 182 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 ATG4BQ9Y4P1 393 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 ASB4Q9Y574 426 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 SYNDIG1LA6NDD5 238 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 TGFBR3LH3BV60 316 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 PROM1O43490 865 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 TMPRSS11DO60235 418 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 NPHS1O60500 1241 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 BPGMP07738 259 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 FAM58BPP0C7Q3 252 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 HTR6P50406 440 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 HNRNPH2P55795 449 aaKnown RBP18.68■□□□□ 0.58
COL9A3-202ENST00000452372 TBL3Q12788 808 aaKnown RBP18.68■□□□□ 0.58
COL9A3-202ENST00000452372 EXT1Q16394 746 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 AGAP7PQ5VUJ5 663 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 JMJD6Q6NYC1 403 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-202ENST00000452372 EFCAB3Q8N7B9 438 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 SREK1Q8WXA9 508 aaKnown RBP18.68■□□□□ 0.58
COL9A3-202ENST00000452372 PSMF1Q92530 271 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 AGAP4Q96P64 663 aa18.68■□□□□ 0.58
COL9A3-202ENST00000452372 HIVEP3Q5T1R4 2406 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 TM9SF1O15321 606 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 CRCPO75575 148 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 GBAP04062 536 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 KLK1P06870 262 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 CELA2AP08217 269 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 UROSP10746 265 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 CHN1P15882 459 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 TPP2P29144 1249 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-202ENST00000452372 TLX1P31314 330 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-202ENST00000452372 BUD31P41223 144 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-202ENST00000452372 TNFRSF17Q02223 184 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 GALNT1Q10472 559 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-202ENST00000452372 BTBD16Q32M84 506 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 IGFL3Q6UXB1 125 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 COMMD6Q7Z4G1 85 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 AMER2Q8N7J2 671 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 C7orf57Q8NEG2 295 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 M1APQ8TC57 530 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 ACPTQ9BZG2 426 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 SHCBP1LQ9BZQ2 653 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 RPF2Q9H7B2 306 aaKnown RBP18.67■□□□□ 0.58
COL9A3-202ENST00000452372 TMBIM4Q9HC24 238 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 TNFRSF12AQ9NP84 129 aa18.67■□□□□ 0.58
COL9A3-202ENST00000452372 A0A1W2PR48 441 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 GOLGA6L10A6NI86 522 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 DPM1O60762 260 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 SORBS2O94875 1100 aaKnown RBP18.66■□□□□ 0.58
COL9A3-202ENST00000452372 ITGAMP11215 1152 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 SERPINB3P29508 390 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 SERPINB5P36952 375 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 SERPINB4P48594 390 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 SLC26A5P58743 744 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 STX4Q12846 297 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 MPP2Q14168 576 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 TERF2Q15554 542 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 CCNYL2Q5T2Q4 361 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 C18orf63Q68DL7 685 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 IGFL2Q6UWQ7 119 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 CLNKQ7Z7G1 428 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 CUZD1Q86UP6 607 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 OR6Y1Q8NGX8 325 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 BRIX1Q8TDN6 353 aaKnown RBP18.66■□□□□ 0.58
COL9A3-202ENST00000452372 CHTF18Q8WVB6 975 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 TANKQ92844 425 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 ANKRD9Q96BM1 317 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-202ENST00000452372 PSMG3-AS1Q96PY0 264 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 LMF1Q96S06 567 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 ALOXE3Q9BYJ1 711 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 MMP25Q9NPA2 562 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 KCNK9Q9NPC2 374 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 ARGLU1Q9NWB6 273 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-202ENST00000452372 VTI1BQ9UEU0 232 aa18.66■□□□□ 0.58
COL9A3-202ENST00000452372 ARHGAP10A1A4S6 786 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 SAGE2PA6NJ88 616 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 A8MUA0 341 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 BIRC5O15392 142 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 LDB3O75112 727 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 ZWINTO95229 277 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 FGF4P08620 206 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 DHRS4L1P0CG22 281 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 UQCRFS1P47985 274 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 BIKQ13323 160 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 SERTAD2Q14140 314 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 ARL13AQ5H913 290 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-202ENST00000452372 CRB2Q5IJ48 1285 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 SCIMPQ6UWF3 145 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 ISLR2Q6UXK2 745 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 ZCCHC23Q6ZST2 131 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms