RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SLC38A5Q8WUX1 472 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 WDR34Q96EX3 536 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 DOK1Q99704 481 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 MS4A8Q9BY19 250 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 RNF167Q9H6Y7 350 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 MYNNQ9NPC7 610 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 AP3M1Q9Y2T2 418 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 C17orf113A0A1B0GUU1 675 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 PRAMEF27A3QJZ7 478 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 NDUFS2O75306 463 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 OCM2P0CE71 109 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 OCMP0CE72 109 aaPredicted RBP14.08□□□□□ -0.16
SF1-211ENST00000448404 PTX3P26022 381 aaPredicted RBP14.08□□□□□ -0.16
SF1-211ENST00000448404 LIM2P55344 173 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 SLC35A2P78381 396 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 KRT33BQ14525 404 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 EIF4HQ15056 248 aaKnown RBP14.08□□□□□ -0.16
SF1-211ENST00000448404 SYPL1Q16563 259 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 SPDYE7PQ495Y7 208 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 CAMKMTQ7Z624 323 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 FBXO15Q8NCQ5 510 aaPredicted RBP14.08□□□□□ -0.16
SF1-211ENST00000448404 MUL1Q969V5 352 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 PHOX2BQ99453 314 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 TRMT61BQ9BVS5 477 aaKnown RBP14.08□□□□□ -0.16
SF1-211ENST00000448404 SFXN1Q9H9B4 322 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 GPR83Q9NYM4 423 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 DMDP11532 3685 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 COL4A3Q01955 1670 aa14.08□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3DA0A087WVF3 549 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3IA0A087WXS9 549 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3EA0A087X179 549 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3KA0A087X1G2 549 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3FA6NER0 549 aaPredicted RBP14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3LB9A6J9 549 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 FFAR1O14842 300 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 PGRMC2O15173 223 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3HP0C7X1 549 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 COL9A1P20849 921 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 NUP107P57740 925 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 EEF1A2Q05639 463 aaKnown RBP14.07□□□□□ -0.16
SF1-211ENST00000448404 ADPRMQ3LIE5 342 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3GQ6DHY5 549 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3CQ6IPX1 549 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 KLHDC8AQ8IYD2 350 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D3Q8IZP1 549 aaPredicted RBP14.07□□□□□ -0.16
SF1-211ENST00000448404 SIMC1Q8NDZ2 872 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 RDH12Q96NR8 316 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 FGF22Q9HCT0 170 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TBC1D23Q9NUY8 699 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 FBXW2Q9UKT8 454 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TRBV4-1A0A0J9YWV2 114 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 NOL3O60936 208 aaKnown RBP14.07□□□□□ -0.16
SF1-211ENST00000448404 JRKO75564 520 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 BCL10O95999 233 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 ITGAMP11215 1152 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 IL1RNP18510 177 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 C21orf58P58505 322 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 CSNK1G2P78368 415 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 GPR19Q15760 415 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 CTF1Q16619 201 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 FAHD1Q6P587 224 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 ZNF765Q7L2R6 523 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 XAGE5Q8WWM1 108 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 TMEM19Q96HH6 336 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 ZNF514Q96K75 400 aaPredicted RBP14.07□□□□□ -0.16
SF1-211ENST00000448404 MAGEB10Q96LZ2 347 aaPredicted RBP14.07□□□□□ -0.16
SF1-211ENST00000448404 ZNF300Q96RE9 604 aaPredicted RBP14.07□□□□□ -0.16
SF1-211ENST00000448404 HDAC8Q9BY41 377 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 ATAD3AQ9NVI7 634 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 SPATA7Q9P0W8 599 aa14.07□□□□□ -0.16
SF1-211ENST00000448404 ZNF99A8MXY4 864 aaPredicted RBP14.06□□□□□ -0.16
SF1-211ENST00000448404 K7EQS6 105 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 OR12D1P0DN82 309 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 RYKP34925 604 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 BCL6P41182 706 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 CD300CQ08708 224 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 MAPK11Q15759 364 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 IFI44LQ53G44 452 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 ZNF362Q5T0B9 420 aaPredicted RBP14.06□□□□□ -0.16
SF1-211ENST00000448404 C18orf63Q68DL7 685 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 LCTLQ6UWM7 567 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 ADAMTSL4Q6UY14 1074 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 DEF8Q6ZN54 512 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 DSG4Q86SJ6 1040 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 TSPYL5Q86VY4 417 aaPredicted RBP14.06□□□□□ -0.16
SF1-211ENST00000448404 KRT78Q8N1N4 520 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 CPA6Q8N4T0 437 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 GPR32P1Q8NGA4 272 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 OR2A1Q8NGT9 310 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 EHD1Q9H4M9 534 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 EQTNQ9NQ60 294 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 TRNAU1APQ9NX07 287 aaKnown RBP14.06□□□□□ -0.16
SF1-211ENST00000448404 MUC22E2RYF6 1773 aaPredicted RBP14.06□□□□□ -0.16
SF1-211ENST00000448404 ARHGEF17Q96PE2 2063 aaPredicted RBP14.06□□□□□ -0.16
SF1-211ENST00000448404 HAT1O14929 419 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 FRS3O43559 492 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 DNAJB6O75190 326 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 CEACAM5P06731 702 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 IGFALSP35858 605 aa14.06□□□□□ -0.16
SF1-211ENST00000448404 CCR8P51685 355 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms