RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 RAB43Q86YS6 212 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 SCUBE1Q8IWY4 988 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTSS-202ENST00000448301 ACTRT2Q8TDY3 377 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 ADAMTS17Q8TE56 1095 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 STON2Q8WXE9 905 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 TANKQ92844 425 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 FAIM2Q9BWQ8 316 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 WDR55Q9H6Y2 383 aaPredicted RBP13.2□□□□□ -0.3
CTSS-202ENST00000448301 MYNNQ9NPC7 610 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 PCDHA9Q9Y5H5 950 aa13.2□□□□□ -0.3
CTSS-202ENST00000448301 IGKV3D-11A0A0A0MRZ8 115 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 PRMT3O60678 531 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 CTNSO60931 367 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 PRKRAO75569 313 aaKnown RBP13.19□□□□□ -0.3
CTSS-202ENST00000448301 VIMP08670 466 aaKnown RBP13.19□□□□□ -0.3
CTSS-202ENST00000448301 IL3P08700 152 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 C8orf89P0DMQ9 161 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 PRPS2P11908 318 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 BCKDHAP12694 445 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 DRD2P14416 443 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 TACR1P25103 407 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 PPP2R1BP30154 601 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 GYS2P54840 703 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 AQP5P55064 265 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 BTG2P78543 158 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 SLC13A2Q13183 592 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 HEPACAMQ14CZ8 416 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 OR52E8Q6IFG1 317 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 CCDC81Q6ZN84 652 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 TMEM132CQ8N3T6 1108 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 ZSCAN1Q8NBB4 408 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 C7orf57Q8NEG2 295 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 METTL21AQ8WXB1 218 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 PTCHD1Q96NR3 888 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 ZNF317Q96PQ6 595 aaPredicted RBP13.19□□□□□ -0.3
CTSS-202ENST00000448301 C1orf50Q9BV19 199 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 FGFR1OP2Q9NVK5 253 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 NOP53Q9NZM5 478 aaKnown RBP13.19□□□□□ -0.3
CTSS-202ENST00000448301 EIF3LQ9Y262 564 aaKnown RBP13.19□□□□□ -0.3
CTSS-202ENST00000448301 IGF2RP11717 2491 aa13.19□□□□□ -0.3
CTSS-202ENST00000448301 PCSK5Q92824 1860 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 LAMA5O15230 3695 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 URB1O60287 2271 aaKnown RBP13.18□□□□□ -0.3
CTSS-202ENST00000448301 GOLGA8QA0A0J9YX86 632 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 A0A1W2PQ72 361 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 GOLGA8OA6NCC3 632 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 GOLGA8NF8WBI6 632 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 DIAPH2O60879 1101 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 ITPKBP27987 946 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 OTX2P32243 289 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 ASMTP46597 345 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 TMPRSS3P57727 454 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 IGLV3-21P80748 117 aaPredicted RBP13.18□□□□□ -0.3
CTSS-202ENST00000448301 IL23RQ5VWK5 629 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 FAM71E1Q6IPT2 247 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 ACAD11Q709F0 780 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 PPP1R32Q7Z5V6 425 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 CLNKQ7Z7G1 428 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 LIX1Q8N485 282 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 CEP70Q8NHQ1 597 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 CDC26Q8NHZ8 85 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 DNAJB14Q8TBM8 379 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 TSLPQ969D9 159 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 IP6K3Q96PC2 410 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 TRIM55Q9BYV6 548 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 NECTIN3Q9NQS3 549 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 HEY2Q9UBP5 337 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 C19orf25Q9UFG5 118 aaPredicted RBP13.18□□□□□ -0.3
CTSS-202ENST00000448301 ZMIZ1Q9ULJ6 1067 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 CLDN16Q9Y5I7 305 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 HS3ST3B1Q9Y662 390 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 CROCCQ5TZA2 2017 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 CHD8Q9HCK8 2581 aa13.18□□□□□ -0.3
CTSS-202ENST00000448301 LOC102723996A0A087X1L8 192 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 TCRBV16S1A1N1A0A5B0 115 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 TGFBR3LH3BV60 316 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 SOCS6O14544 535 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 POLR3GO15318 223 aaPredicted RBP13.17□□□□□ -0.3
CTSS-202ENST00000448301 NKX2-8O15522 239 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 FGF17O60258 216 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 LDB3O75112 727 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 TROVE2P10155 538 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTSS-202ENST00000448301 PCSK2P16519 638 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 DDCP20711 480 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 MAOAP21397 527 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 IDH3AP50213 366 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 C2orf80Q0P641 193 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 CDC20Q12834 499 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 BIKQ13323 160 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 NSDHLQ15738 373 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 CGB2Q6NT52 195 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 SLC48A1Q6P1K1 146 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 SPATA19Q7Z5L4 167 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 FAM9CQ8IZT9 166 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 ANKRD9Q96BM1 317 aaPredicted RBP13.17□□□□□ -0.3
CTSS-202ENST00000448301 CHMP6Q96FZ7 201 aa13.17□□□□□ -0.3
CTSS-202ENST00000448301 VPS50Q96JG6 964 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms