RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 MYOCOSA0A1B0GUC4 107 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 FAM166BA8MTA8 275 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 UBXN8O00124 270 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 SAP18O00422 153 aaKnown RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 RTCAO00442 366 aaKnown RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 FANCGO15287 622 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 PRKNO60260 465 aaPredicted RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 LDB3O75112 727 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 OR6B1O95007 311 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 TGFB1P01137 390 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 P04436 131 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 GFAPP14136 432 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 CD22P20273 847 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 BUD31P41223 144 aaPredicted RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 MAGEA4P43358 317 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 HK2P52789 917 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 GPX6P59796 221 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 BIKQ13323 160 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 NDUFAF5Q5TEU4 345 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 KHDRBS2Q5VWX1 349 aaKnown RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 GRHL2Q6ISB3 625 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 KLC3Q6P597 504 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 MEX3BQ6ZN04 569 aaKnown RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 ZNF793Q6ZN11 406 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 CEP128Q6ZU80 1094 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 FAM47EQ6ZV65 393 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 FGD2Q7Z6J4 655 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 LAS2Q8IYD9 372 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 TEX9Q8N6V9 391 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 OR5M3Q8NGP4 307 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 SLC22A8Q8TCC7 542 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 FBF1Q8TES7 1133 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 ZNF473Q8WTR7 871 aaKnown RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 PTPMT1Q8WUK0 201 aaPredicted RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 RGMAQ96B86 450 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 SGCZQ96LD1 299 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 FAM173AQ9BQD7 235 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 TRIM8Q9BZR9 551 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 DEFB127Q9H1M4 99 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 LIN28AQ9H9Z2 209 aaKnown RBP10.93□□□□□ -0.66
TTC28-203ENST00000442232 PRDM7Q9NQW5 492 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 SACM1LQ9NTJ5 587 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 ACOT9Q9Y305 439 aa10.93□□□□□ -0.66
TTC28-203ENST00000442232 PHF3Q92576 2039 aaKnown RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 EML6Q6ZMW3 1958 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 DNAJC13O75165 2243 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 ZNF407Q9C0G0 2248 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 CSMD1Q96PZ7 3565 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 CCDC189A1A4V9 331 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 C19orf84I3L1E1 186 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 PRAMEF4O60810 478 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 FAM155BO75949 473 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 TBX6O95947 436 aaPredicted RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 SLC35E2BP0CK96 405 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 CHRNB4P30926 498 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 PHBP35232 272 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 ARL1P40616 181 aaPredicted RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 STT3AP46977 705 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 PIK3CGP48736 1102 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 RNF4P78317 190 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 ID2Q02363 134 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 SLAMF1Q13291 335 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 UAP1Q16222 522 aaPredicted RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 PRAMEF9Q5VWM5 478 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 OR4C11Q6IEV9 310 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 C16orf47Q6ZP98 133 aaPredicted RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 ACAD11Q709F0 780 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 CHERPQ8IWX8 916 aaKnown RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 GOLM1Q8NBJ4 401 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 OR7G3Q8NG95 312 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 OR52N2Q8NGI0 321 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 FBXO25Q8TCJ0 367 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 RND1Q92730 232 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 RBM18Q96H35 190 aaKnown RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 ATOH8Q96SQ7 321 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 SPOCK3Q9BQ16 436 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 PELOQ9BRX2 385 aaKnown RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 TTTY12Q9BZ98 90 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 LDAHQ9H6V9 325 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 EXO5Q9H790 373 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 RPF2Q9H7B2 306 aaKnown RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 ACTR8Q9H981 624 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 WDR41Q9HAD4 459 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 LYARQ9NX58 379 aaKnown RBP10.92□□□□□ -0.66
TTC28-203ENST00000442232 PCDHGA11Q9Y5H2 935 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 CLDN16Q9Y5I7 305 aa10.92□□□□□ -0.66
TTC28-203ENST00000442232 TMEM200CA6NKL6 621 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 FIGNL2A6NMB9 653 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 FAM90A27PA6NNH2 459 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 NPIPA2E9PIF3 369 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 NPIPA3F8WFD2 350 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 G3V3Y1 287 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 ADAM10O14672 748 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 BCKDKO14874 412 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 FGF17O60258 216 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 OR10H2O60403 315 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 SCELO95171 688 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 EPORP19235 508 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 CNR1P21554 472 aa10.91□□□□□ -0.66
TTC28-203ENST00000442232 PIK3CBP42338 1070 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms