RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZRSR2Q15696 482 aaKnown RBP17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 MAPKAPK3Q16644 382 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 MRM1Q6IN84 353 aaKnown RBP17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 FJX1Q86VR8 437 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 ZNF321PQ8N8H1 164 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 OR14A16Q8NHC5 309 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 DAZLQ92904 295 aaKnown RBP17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 REPS1Q96D71 796 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 PHF21BQ96EK2 531 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 GPR137Q96N19 417 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 CDK15Q96Q40 435 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 NOL11Q9H8H0 719 aaKnown RBP17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 CLCA3PQ9Y6N3 262 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 SPACA6W5XKT8 324 aa17.6■□□□□ 0.41
HMGB3P22-201ENST00000442010 A0A0A6YYD5 115 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 FOXE1O00358 373 aaPredicted RBP17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 FGF17O60258 216 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 ZFAND5O76080 213 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 CLDN9O95484 217 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 NEK2P51955 445 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 PER3P56645 1201 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 ALDH6A1Q02252 535 aaKnown RBP17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 ID2Q02363 134 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 TRAF3Q13114 568 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 KRTCAP3Q53RY4 240 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 RNFT1Q5M7Z0 435 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 ADGRD1Q6QNK2 874 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 TIFABQ6ZNK6 161 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 C16orf47Q6ZP98 133 aaPredicted RBP17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 NSUN5Q96P11 429 aaKnown RBP17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 MRPL57Q9BQC6 102 aaKnown RBP17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 TXLNGYQ9BZA5 131 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 DDX31Q9H8H2 851 aaKnown RBP17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 MS4A12Q9NXJ0 267 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 YARS2Q9Y2Z4 477 aaKnown RBP17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 ATG4BQ9Y4P1 393 aa17.59■□□□□ 0.41
HMGB3P22-201ENST00000442010 EXOC1LA0A1B0GW35 172 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 C17orf105B2RV13 164 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 RIPK2O43353 540 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 ZG16O60844 167 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 EEDO75530 441 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 RPS17P08708 135 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 SNRPAP09012 282 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 COL8A1P27658 744 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 CA7P43166 264 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 RAP1GDS1P52306 607 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 PHEXP78562 749 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 TNFRSF17Q02223 184 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 C18orf63Q68DL7 685 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 TRMT10CQ7L0Y3 403 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 GPR180Q86V85 440 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 OR4N5Q8IXE1 308 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 IFT20Q8IY31 132 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 CPSF7Q8N684 471 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 FAM98AQ8NCA5 519 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 C7orf57Q8NEG2 295 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 OR8K3Q8NH51 312 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 SLC2A12Q8TD20 617 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 ZNF721Q8TF20 911 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 SCYL1Q96KG9 808 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 CCDC77Q9BR77 488 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 CENPKQ9BS16 269 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 C1QTNF3Q9BXJ4 246 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 TSPAN10Q9H1Z9 355 aaPredicted RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 MRPL46Q9H2W6 279 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 EPB41L4BQ9H329 900 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 RPF2Q9H7B2 306 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 LIN28AQ9H9Z2 209 aaKnown RBP17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 MYOTQ9UBF9 498 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 ZNF835Q9Y2P0 537 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 ASB4Q9Y574 426 aa17.58■□□□□ 0.4
HMGB3P22-201ENST00000442010 A0A1B0GTL3 188 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 NPIPA5E9PKD4 350 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 PROM1O43490 865 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 TMPRSS11DO60235 418 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 SMIM24O75264 130 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 PRKRAO75569 313 aaKnown RBP17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 OR2J2O76002 312 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 FAM153BP0C7A2 387 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 STT3AP46977 705 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 HK2P52789 917 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 FAM153CQ494X1 144 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 GGTA1PQ4G0N0 100 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 HSDL2Q6YN16 418 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 MDGA2Q7Z553 956 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 SULF2Q8IWU5 870 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 CHERPQ8IWX8 916 aaKnown RBP17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 CYP4Z2PQ8N1L4 340 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 TMEM156Q8N614 296 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 TMEM125Q96AQ2 219 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 OR8D2Q9GZM6 311 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 PHF11Q9UIL8 331 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 NPIPA1Q9UND3 350 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 KLF13Q9Y2Y9 288 aaPredicted RBP17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 NOTCH2Q04721 2471 aa17.57■□□□□ 0.4
HMGB3P22-201ENST00000442010 CENPEQ02224 2701 aa17.56■□□□□ 0.4
HMGB3P22-201ENST00000442010 CACNA1CQ13936 2221 aa17.56■□□□□ 0.4
HMGB3P22-201ENST00000442010 CRYBG3Q68DQ2 2970 aa17.56■□□□□ 0.4
HMGB3P22-201ENST00000442010 TRGV8A0A0C4DH27 118 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms