RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NDRG2Q9UN36 371 aaKnown RBP11.37□□□□□ -0.59
LTBR-203ENST00000441074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 TRIM77I1YAP6 450 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PRMT3O60678 531 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 TPST2O60704 377 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 STK16O75716 305 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 SCO1O75880 301 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 CPSF4O95639 269 aaKnown RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 NUDT7P0C024 238 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PRKAR1AP10644 381 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 DDX5P17844 614 aaKnown RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 IRS1P35568 1242 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 MAN2A2P49641 1150 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PER3P56645 1201 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 MXD1Q05195 221 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 ZNF177Q13360 481 aaPredicted RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 ZNF628Q5EBL2 1059 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 RBFAQ8N0V3 343 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PHOSPHO2Q8TCD6 241 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 APIPQ96GX9 242 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 GPR137Q96N19 417 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 QRFPRQ96P65 431 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 MND1Q9BWT6 205 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 CIPCQ9C0C6 399 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 ZBP1Q9H171 429 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PRO3102Q9H379 93 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 CERS4Q9HA82 394 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 MRPL39Q9NYK5 338 aaKnown RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 IL17CQ9P0M4 197 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 FTSJ1Q9UET6 329 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 CLEC2DQ9UHP7 191 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 FZD4Q9ULV1 537 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 PCDHGC4Q9Y5F7 938 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PCDHGB7Q9Y5F8 929 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 KCNE2Q9Y6J6 123 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PRRC2BQ5JSZ5 2229 aaKnown RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 A0A1W2PRU2 124 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PRR23AA6NEV1 266 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 CCL16O15467 120 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 ORC5O43913 435 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 GCM2O75603 506 aaPredicted RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 RFPL3O75679 317 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 MSL3P1P0C860 447 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 AMD1P17707 334 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 TNNI3P19429 210 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 GABRR2P28476 465 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 SMAD3P84022 425 aaKnown RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 MLLT11Q13015 90 aaPredicted RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 TEAD4Q15561 434 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 UGT8Q16880 541 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 WSCD2Q2TBF2 565 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 IFI44LQ53G44 452 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 LYPLAL1Q5VWZ2 237 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 RNLSQ5VYX0 342 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 TRIQKQ629K1 86 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 NOXRED1Q6NXP6 359 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 FAM122CQ6P4D5 195 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 NCEH1Q6PIU2 408 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 LINGO4Q6UY18 593 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 HDDC2Q7Z4H3 204 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 SLC34A3Q8N130 599 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 OR9Q2Q8NGE9 314 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 OR8J2Q8NGG1 315 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 CSGALNACT1Q8TDX6 532 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 KLHL6Q8WZ60 621 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 ZBED6CLQ96FA7 236 aaPredicted RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 APOLD1Q96LR9 279 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 ELOVL6Q9H5J4 265 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 ANKRA2Q9H9E1 313 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 RDH14Q9HBH5 336 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 TXNL4BQ9NX01 149 aaKnown RBP11.36□□□□□ -0.59
LTBR-203ENST00000441074 CORO2BQ9UQ03 480 aa11.36□□□□□ -0.59
LTBR-203ENST00000441074 PTPRSQ13332 1948 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 A0A1B0GVM2 712 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 FAM240BA0A1B0GVZ2 78 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 WWP2O00308 870 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 ENTPD6O75354 484 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 TNFRSF21O75509 655 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 AP2A2O94973 939 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 CLEC2LP0C7M8 214 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 SLC2A2P11168 524 aaPredicted RBP11.35□□□□□ -0.59
LTBR-203ENST00000441074 HLA-EP13747 358 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 ARSBP15848 533 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 EPORP19235 508 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 PPIBP23284 216 aaKnown RBP11.35□□□□□ -0.59
LTBR-203ENST00000441074 AQP1P29972 269 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 SSTR4P31391 388 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 CNR2P34972 360 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 HMGCLP35914 325 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 CCR2P41597 374 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 CRISP1P54107 249 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 BOP1Q14137 746 aaKnown RBP11.35□□□□□ -0.59
LTBR-203ENST00000441074 MFSD13AQ14CX5 517 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 PTPRRQ15256 657 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 TPGS2Q68CL5 300 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 FRMPD2BQ6IN97 320 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms