RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CYP2A6P11509 494 aaPredicted RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 RPS5P46782 204 aaKnown RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 DCDC1P59894 354 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ABATP80404 500 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 RPL6Q02878 288 aaKnown RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 CHRNEQ04844 493 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 PIN1Q13526 163 aaPredicted RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 EFR3AQ14156 821 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 SLBPQ14493 270 aaKnown RBP eCLIP8.65□□□□□ -1.02
COPB1-202ENST00000439561 POU4F3Q15319 338 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 GPR33Q49SQ1 333 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 KLHL12Q53G59 568 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 Q5BKY6 102 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 SAXO2Q658L1 398 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 SYNPOQ8N3V7 929 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 DNAJC5GQ8N7S2 189 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 TRMT61AQ96FX7 289 aaKnown RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 RIPOR3Q96MK2 946 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ZFP3Q96NJ6 502 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 GON7Q9BXV9 100 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 PADI2Q9Y2J8 665 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 PCDHB7Q9Y5E2 793 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ENPP4Q9Y6X5 453 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 A0A0G2JMZ2 1700 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 LRRC37A2A6NM11 1700 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 A0A075B6Q4 140 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 WASHC1A8K0Z3 465 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 A8MUA0 341 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 ZNF670-ZNF695F2Z2N8 137 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 TEX28O15482 410 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 PTPN6P29350 595 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 PTGER1P34995 402 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 HNMTP50135 292 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 RPS25P62851 125 aaKnown RBP8.65□□□□□ -1.03
COPB1-202ENST00000439561 RPA4Q13156 261 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 ZNF79Q15937 498 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 DUSP7Q16829 419 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 MED27Q6P2C8 311 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 CD300LGQ6UXG3 332 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 PLEKHM3Q6ZWE6 761 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 OXR1Q8N573 874 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 ARL14EPQ8N8R7 260 aaPredicted RBP8.65□□□□□ -1.03
COPB1-202ENST00000439561 GDPD1Q8N9F7 314 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 PIGKQ92643 395 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 MRPS31Q92665 395 aaKnown RBP8.65□□□□□ -1.03
COPB1-202ENST00000439561 KAT2AQ92830 837 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 CHIAQ9BZP6 476 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 IL20RAQ9UHF4 553 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 ADAM30Q9UKF2 790 aa8.65□□□□□ -1.03
COPB1-202ENST00000439561 MN1Q10571 1320 aaPredicted RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 SH3D21A4FU49 640 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 SNTNA6NMZ2 147 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 PRR23D1E9PI22 279 aaPredicted RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 ZNF623O75123 536 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 OAZ2O95190 189 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 ETHE1O95571 254 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 PRR23D2P0DMB1 279 aaPredicted RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 SSTR2P30874 369 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 ZNF81P51508 661 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 RTP2Q5QGT7 225 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 C9orf131Q5VYM1 1079 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 FAM205BPQ63HN1 556 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 FUT10Q6P4F1 479 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 MZT2AQ6P582 158 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 IL20RBQ6UXL0 311 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 OLIG3Q7RTU3 272 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 PHC2Q8IXK0 858 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 WBP2Q969T9 261 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 DPCDQ9BVM2 203 aaPredicted RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 SORBS1Q9BX66 1292 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 C12orf4Q9NQ89 552 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 EIF3KQ9UBQ5 218 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 EXTL2Q9UBQ6 330 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 LSM7Q9UK45 103 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 NCKAP1Q9Y2A7 1128 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 DHFRP00374 187 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 TIA1P31483 386 aaKnown RBP eCLIP8.64□□□□□ -1.033e-7■■■■□ 22.1
COPB1-202ENST00000439561 WNT3P56703 355 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 P2RY14Q15391 338 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 CCSMST1Q4G0I0 132 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 BHLHB9Q6PI77 547 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 MACC1Q6ZN28 852 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 SLC24A5Q71RS6 500 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 IQCHQ86VS3 1027 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 TRAPPC5Q8IUR0 188 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 OR7G3Q8NG95 312 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 NEIL3Q8TAT5 605 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 TEX47Q8TBZ9 253 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 AKAP1Q92667 903 aaKnown RBP eCLIP8.64□□□□□ -1.03
COPB1-202ENST00000439561 ARMC5Q96C12 935 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 QRFPRQ96P65 431 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 TEFMQ96QE5 360 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 SLC12A9Q9BXP2 914 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.64□□□□□ -1.03
COPB1-202ENST00000439561 REEP4Q9H6H4 257 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 ACER3Q9NUN7 267 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 CNOT2Q9NZN8 540 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 LHX3Q9UBR4 397 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms