RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SEC24CP53992 1094 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 CLCQ05315 142 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 NSDHLQ15738 373 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 SFT2D3Q587I9 215 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 ARL13AQ5H913 290 aaPredicted RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 ACER2Q5QJU3 275 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 PLAG1Q6DJT9 500 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 CAPN13Q6MZZ7 669 aaPredicted RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 TMEM214Q6NUQ4 689 aaKnown RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 MTFR2Q6P444 385 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 FRMD7Q6ZUT3 714 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 GOLGA7Q7Z5G4 137 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 MRGPRGQ86SM5 289 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 TICAM1Q8IUC6 712 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 MCEMP1Q8IX19 187 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 BEST3Q8N1M1 668 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 TEX9Q8N6V9 391 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 SNX31Q8N9S9 440 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 MFSD9Q8NBP5 474 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 KCT2Q8NC54 265 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 TRPC4APQ8TEL6 797 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 ZNF483Q8TF39 744 aaPredicted RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 CHMP6Q96FZ7 201 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 PEX11GQ96HA9 241 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 ZNF317Q96PQ6 595 aaPredicted RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 UTP23Q9BRU9 249 aaKnown RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 C1QTNF3Q9BXJ4 246 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 SHCBP1LQ9BZQ2 653 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 C20orf27Q9GZN8 174 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 GSTO2Q9H4Y5 243 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 SEMA4BQ9NPR2 832 aaPredicted RBP8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 THAP1Q9NVV9 213 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 ANKRD10Q9NXR5 420 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 NAALAD2Q9Y3Q0 740 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 ANGPTL3Q9Y5C1 460 aa8.64□□□□□ -1.03
AC011228.1-201ENST00000439027 GMNCA6NCL1 334 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 OR1F1O43749 312 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 SHOX2O60902 331 aaPredicted RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 WDR47O94967 919 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 CHRNGP07510 517 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 CYC1P08574 325 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 SNRPB2P08579 225 aaKnown RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 SLC35G6P0C7Q6 338 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 ESRRAP11474 423 aaPredicted RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 PRF1P14222 555 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 EPB42P16452 691 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 CCND1P24385 295 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 SERPINB5P36952 375 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 CD96P40200 585 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 CCR8P51685 355 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 OR4D2P58180 307 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TAS2R50P59544 299 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 NAA20P61599 178 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 OCRLQ01968 901 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 MEF2AQ02078 507 aaPredicted RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 OC90Q02509 493 aaPredicted RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 LCP2Q13094 533 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 ART3Q13508 389 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TUBA3CQ13748 450 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 GTF2H2Q13888 395 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 ABRAXAS2Q15018 415 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 OR1C1Q15619 314 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 EXT1Q16394 746 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 MEP1AQ16819 746 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 GTF2H2CQ6P1K8 395 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 METTL2BQ6P1Q9 378 aaKnown RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TUBA3EQ6PEY2 450 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 PAPD4Q6PIY7 484 aaKnown RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 LCTLQ6UWM7 567 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 THOC6Q86W42 341 aaKnown RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 PDSS2Q86YH6 399 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 CRLF3Q8IUI8 442 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TBC1D19Q8N5T2 526 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 OR5T3Q8NGG3 340 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 OR56A3Q8NH54 315 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 M1APQ8TC57 530 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 ITLN2Q8WWU7 325 aaPredicted RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TSLPQ969D9 159 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 ATP6V1E2Q96A05 226 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TM4SF19Q96DZ7 209 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 CCDC120Q96HB5 630 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 MAGED4Q96JG8 741 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 SORT1Q99523 831 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 LPAR4Q99677 370 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 HAUS8Q9BT25 410 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TRMOQ9BU70 441 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 FAM107BQ9H098 131 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 TSPAN10Q9H1Z9 355 aaPredicted RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 RABEP2Q9H5N1 569 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 NOL11Q9H8H0 719 aaKnown RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 IPPKQ9H8X2 491 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 EML4Q9HC35 981 aaKnown RBP8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 ZBTB26Q9HCK0 441 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 DNAJC11Q9NVH1 559 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 FGFR1OP2Q9NVK5 253 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 SLC22A14Q9Y267 594 aa8.63□□□□□ -1.03
AC011228.1-201ENST00000439027 GTF3C1Q12789 2109 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms