RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SIGLEC14Q08ET2 396 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 DMWDQ09019 674 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MSLNQ13421 630 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ART3Q13508 389 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CUL3Q13618 768 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 DGCR6Q14129 220 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MFSD13AQ14CX5 517 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TRIP10Q15642 601 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ETFDHQ16134 617 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 EXT1Q16394 746 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SGCAQ16586 387 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MOGQ16653 247 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TATDN3Q17R31 274 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CTU2Q2VPK5 515 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MANEAQ5SRI9 462 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF658Q5TYW1 1059 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 GPR157Q5UAW9 335 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 AGAP6Q5VW22 663 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 IL23RQ5VWK5 629 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF470Q6ECI4 717 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 PRR27Q6MZM9 219 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CEP85Q6P2H3 762 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 FIGLAQ6QHK4 219 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 VSTM1Q6UX27 236 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 WASH2PQ6VEQ5 465 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 KYAT3Q6YP21 454 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 Q6ZPB1 254 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MEPCEQ7L2J0 689 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 C16orf62Q7Z3J2 963 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 DCXRQ7Z4W1 244 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 IRF2BP2Q7Z5L9 587 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 LHFPL4Q7Z7J7 247 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TBC1D26Q86UD7 250 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 AKAP14Q86UN6 197 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 NOXA1Q86UR1 476 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MEX3DQ86XN8 651 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MICU2Q8IYU8 434 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 GALNT16Q8N428 558 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 PQLC3Q8N755 202 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SMYD1Q8NB12 490 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM83FQ8NEG4 500 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ENGASEQ8NFI3 743 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TTLQ8NG68 377 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR4C5Q8NGB2 326 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR13C9Q8NGT0 318 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TBC1D16Q8TBP0 767 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 FANK1Q8TC84 345 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 DTX3LQ8TDB6 740 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SAP25Q8TEE9 199 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 U2AF1L4Q8WU68 220 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM170AQ8WVE7 144 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ARNTL2Q8WYA1 636 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ING5Q8WYH8 240 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SUSD6Q92537 303 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 HAS2Q92819 552 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADIPOR1Q96A54 375 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 FUBP1Q96AE4 644 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TM4SF19Q96DZ7 209 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM20AQ96MK3 541 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TECTBQ96PL2 329 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ACOX2Q99424 681 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SEPHS2Q99611 448 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SH3GL3Q99963 347 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCM2Q9BSQ5 444 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TEKT3Q9BXF9 490 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ANGPTL4Q9BY76 406 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TRIM9Q9C026 710 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC39A8Q9C0K1 460 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZMYND12Q9H0C1 365 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 OPN3Q9H1Y3 402 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 LRMDAQ9H2I8 198 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CSNK1G1Q9HCP0 422 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 LYRM4Q9HD34 91 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 Q9N2J8 555 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAB18Q9NP72 206 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MRPS30Q9NP92 439 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF302Q9NR11 478 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC2A8Q9NY64 477 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 NKIRAS1Q9NYS0 192 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CTTNBP2NLQ9P2B4 639 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF229Q9UJW7 825 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDH9Q9ULB4 789 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 VANGL2Q9ULK5 521 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ST3GAL5Q9UNP4 418 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ICKQ9UPZ9 632 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TNNQ9UQP3 1299 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 B3GNT3Q9Y2A9 372 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 POFUT2Q9Y2G5 429 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 GRIP1Q9Y3R0 1128 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 RNF115Q9Y4L5 304 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 PEG3Q9GZU2 1588 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 LOC105371267A0A1B0GV96 52 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PLSCR5A0PG75 271 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TUBAL3A6NHL2 446 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PCP4L1A6NKN8 68 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SNTNA6NMZ2 147 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 HEPACAM2A8MVW5 462 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 NPIPA2E9PIF3 369 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms