RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 OPN5Q6U736 354 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZNF704Q6ZNC4 412 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 DNM1P46Q6ZS02 220 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SCUBE1Q8IWY4 988 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CA13Q8N1Q1 262 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TMEM52Q8NDY8 209 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 OR52K1Q8NGK4 314 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 UTP15Q8TED0 518 aaKnown RBP11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 C1orf159Q96HA4 380 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 LRRC40Q9H9A6 602 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 L2HGDHQ9H9P8 463 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FAM114A2Q9NRY5 505 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TMEM160Q9NX00 188 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TRRAPQ9Y4A5 3859 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 A0A096LNT2 108 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 A0A0G2JK05 382 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 C4orf51C9J302 202 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 APOC4-APOC2K7ER74 178 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RCBTB2O95199 551 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 APOC2P02655 101 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CATP04040 527 aaKnown RBP11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PGRP06401 933 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SRD5A1P18405 259 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 HRH2P25021 359 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PPARGP37231 505 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CDKN1AP38936 164 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 MARCKSL1P49006 195 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RNF4P78317 190 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PLAURQ03405 335 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ACVR1Q04771 509 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RPS6KA1Q15418 735 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SF3B4Q15427 424 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TMEM249Q2WGJ8 235 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ANKRD34AQ69YU3 496 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 DARS2Q6PI48 645 aaKnown RBP11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZNF474Q6S9Z5 364 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 BBS12Q6ZW61 710 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 MEX3DQ86XN8 651 aaKnown RBP11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ACTL9Q8TC94 416 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PAQR8Q8TEZ7 354 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 MRFAP1L1Q96HT8 127 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ART5Q96L15 291 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NAP1L5Q96NT1 182 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 BIRC8Q96P09 236 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FAM111AQ96PZ2 611 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TUBA1CQ9BQE3 449 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PIGMQ9H3S5 423 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 KLHL31Q9H511 634 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CATSPERZQ9NTU4 200 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 LPAR3Q9UBY5 353 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PACSIN3Q9UKS6 424 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZNF148Q9UQR1 794 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 MMACHCQ9Y4U1 282 aa11.19□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FREM1Q5H8C1 2179 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 GFYI3L273 518 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 OVOL3O00110 214 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 HS3ST1O14792 307 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 KLF4O43474 513 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 AVILO75366 819 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FBXO24O75426 580 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TNFSF13O75888 250 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SMNDC1O75940 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 STK10O94804 968 aaKnown RBP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 IGHV4-39P01824 125 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 C1QAP02745 245 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RBP3P10745 1247 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CDH1P12830 882 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CD33P20138 364 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RPS3P23396 243 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ATP5DP30049 168 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FMO4P31512 558 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 UGT2B10P36537 528 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 DIO3P55073 304 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 EIF3EP60228 445 aaKnown RBP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TBPL1P62380 186 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RPS4XP62701 263 aaKnown RBP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PRAMEP78395 509 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ASPHQ12797 758 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PWP1Q13610 501 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ETFDHQ16134 617 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 EIPR1Q53HC9 387 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PIGGQ5H8A4 983 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CLNKQ7Z7G1 428 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 KIAA1328Q86T90 577 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CDKL3Q8IVW4 592 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 REXO1L1PQ8IX06 675 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZNF611Q8N823 705 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PTPMT1Q8WUK0 201 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 LRRC45Q96CN5 670 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 OR8D2Q9GZM6 311 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 GOLPH3Q9H4A6 298 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ESRP2Q9H6T0 727 aaKnown RBP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CCDC177Q9NQR7 707 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ANAPC5Q9UJX4 755 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 MED12LQ86YW9 2145 aa11.18□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PRKDCP78527 4128 aaKnown RBP11.17□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms