RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 WNT16Q9UBV4 365 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 ASB4Q9Y574 426 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 ZW10O43264 779 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 RPS6KA3P51812 740 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 TJAP1Q5JTD0 557 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 REEP3Q6NUK4 255 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 CEACAM20Q6UY09 585 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 RBM44Q6ZP01 1051 aaKnown RBP24.37■■□□□ 1.49
CPNE1-216ENST00000437340 SYT13Q7L8C5 426 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 TMEM121BQ9BXQ6 578 aaPredicted RBP24.37■■□□□ 1.49
CPNE1-216ENST00000437340 LMAN1LQ9HAT1 526 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 SLC35C2Q9NQQ7 365 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 PCDHGB3Q9Y5G1 929 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 LOC100130705A0A1B0GUX0 176 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 CHURC1-FNTBB4DL54 471 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 C4orf51C9J302 202 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 DIRAS1O95057 198 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 C9P02748 559 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 PIGAP37287 484 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 CDH15P55291 814 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 HSPB3Q12988 150 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 TCEA2Q15560 299 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 SPDYE7PQ495Y7 208 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 PRRT3Q5FWE3 981 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 ANKRD34AQ69YU3 496 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 C6orf120Q7Z4R8 191 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 SLC22A18ASQ8N1D0 253 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 PIK3C3Q8NEB9 887 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 FLVCR1-AS1Q8TAF5 88 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 SPPL2AQ8TCT8 520 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 TOE1Q96GM8 510 aaKnown RBP24.37■■□□□ 1.49
CPNE1-216ENST00000437340 FOXQ1Q9C009 403 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 LTB4R2Q9NPC1 389 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 THSD1Q9NS62 852 aa24.37■■□□□ 1.49
CPNE1-216ENST00000437340 THUMPD1Q9NXG2 353 aaKnown RBP24.37■■□□□ 1.49
CPNE1-216ENST00000437340 PLXND1Q9Y4D7 1925 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 OR2A25A4D2G3 310 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 ADAMDEC1O15204 470 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 TNFSF14O43557 240 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 ITGA2P17301 1181 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 MAGEA8P43361 318 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 HLCSP50747 726 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 STARD6P59095 220 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 FZD5Q13467 585 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 UBXN2BQ14CS0 331 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 RBM48Q5RL73 367 aaKnown RBP24.36■■□□□ 1.49
CPNE1-216ENST00000437340 CYP4Z1Q86W10 505 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 ARMC8Q8IUR7 673 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 OR8K5Q8NH50 307 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 NT5CQ8TCD5 201 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 GSDMCQ9BYG8 508 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 RUBCNLQ9H714 662 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 POT1Q9NUX5 634 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 NDUFAF4Q9P032 175 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 PDP1Q9P0J1 537 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-216ENST00000437340 ANKMY1Q9P2S6 941 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 APOBEC3BQ9UH17 382 aaKnown RBP24.36■■□□□ 1.49
CPNE1-216ENST00000437340 CYP8B1Q9UNU6 501 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 KLHL20Q9Y2M5 609 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 COMMD3-BMI1R4GMX3 469 aa24.36■■□□□ 1.49
CPNE1-216ENST00000437340 VILLO15195 856 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 JRKO75564 520 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 OPN1SWP03999 348 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 CDH2P19022 906 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-216ENST00000437340 GSTT1P30711 240 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 NTSP30990 170 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 CCT3P49368 545 aaKnown RBP24.35■■□□□ 1.49
CPNE1-216ENST00000437340 CDK9P50750 372 aaKnown RBP24.35■■□□□ 1.49
CPNE1-216ENST00000437340 DAPP51397 102 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 TRIM48Q8IWZ4 208 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 SIX5Q8N196 739 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 GAL3ST3Q96A11 431 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 AMDHD1Q96NU7 426 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 OR2A14Q96R47 310 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 BARD1Q99728 777 aaKnown RBP24.35■■□□□ 1.49
CPNE1-216ENST00000437340 MACROD1Q9BQ69 325 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 GLIPR2Q9H4G4 154 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 GPR27Q9NS67 375 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 C2orf42Q9NWW7 574 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 LYARQ9NX58 379 aaKnown RBP24.35■■□□□ 1.49
CPNE1-216ENST00000437340 WSB2Q9NYS7 404 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-216ENST00000437340 ZNF451Q9Y4E5 1061 aa24.35■■□□□ 1.49
CPNE1-216ENST00000437340 TRBV23OR9-2A0A075B6M9 112 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 FAM221BA6H8Z2 402 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 OR5K4A6NMS3 321 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 UGT2B11O75310 529 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 RYKP34925 604 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 TPD52P55327 224 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-216ENST00000437340 RGS1Q08116 209 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 GAS6Q14393 721 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 TSEN54Q7Z6J9 526 aaKnown RBP24.34■■□□□ 1.49
CPNE1-216ENST00000437340 HORMAD2Q8N7B1 307 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 GEMIN6Q8WXD5 167 aaKnown RBP24.34■■□□□ 1.49
CPNE1-216ENST00000437340 HDAC2Q92769 488 aaKnown RBP24.34■■□□□ 1.49
CPNE1-216ENST00000437340 MRPS17Q9Y2R5 130 aaKnown RBP24.34■■□□□ 1.49
CPNE1-216ENST00000437340 PCDHGA8Q9Y5G5 932 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 A0A1W2PR48 441 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 KIF1CO43896 1103 aaKnown RBP24.34■■□□□ 1.49
CPNE1-216ENST00000437340 STATHP02808 62 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 FESP07332 822 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms