RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 TMEM38AQ9H6F2 299 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 GIMAP4Q9NUV9 329 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 ADPRHL2Q9NX46 363 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 POMT2Q9UKY4 750 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 ENTPD4Q9Y227 616 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 LOC105369274A0A096LPK9 316 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 LOC102723532A0A0G2JNH3 316 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 C7orf72A4D263 438 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 H0YGG7 62 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 VILLO15195 856 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 BCAT2O15382 392 aaPredicted RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 PROM1O43490 865 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 PRAMEF10O60809 474 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 CDH3P22223 829 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 AQP1P29972 269 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 PPM1FP49593 454 aaPredicted RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 AFF3P51826 1226 aaKnown RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 NCBP2P52298 156 aaKnown RBP eCLIP13.54□□□□□ -0.24
CALD1-207ENST00000430085 ARF3P61204 181 aaPredicted RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 DMWDQ09019 674 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 SCARB2Q14108 478 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 ZNF630Q2M218 657 aaPredicted RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
CALD1-207ENST00000430085 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 C18orf63Q68DL7 685 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 CBLL1Q75N03 491 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 RNF44Q7L0R7 432 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 EIF3MQ7L2H7 374 aaKnown RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 DGLUCYQ7Z3D6 616 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 ZNF438Q7Z4V0 828 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 OR4N4Q8N0Y3 316 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 SDR16C5Q8N3Y7 309 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 DNASE2BQ8WZ79 361 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 GATA6Q92908 595 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 TMBIM1Q969X1 311 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 SDCCAG3Q96C92 435 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 NEURL3Q96EH8 262 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 CNBD2Q96M20 576 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 AMDHD1Q96NU7 426 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 SERINC2Q96SA4 455 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 SLC38A3Q99624 504 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 MAPKAP1Q9BPZ7 522 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 CCDC3Q9BQI4 270 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 DUSP15Q9H1R2 295 aaPredicted RBP13.54□□□□□ -0.24
CALD1-207ENST00000430085 SEMA6CQ9H3T2 930 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 BATF3Q9NR55 127 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 C1GALT1Q9NS00 363 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 SNX11Q9Y5W9 270 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 CEP192Q8TEP8 1941 aa13.54□□□□□ -0.24
CALD1-207ENST00000430085 DMDP11532 3685 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 LMO7DNF2Z398 122 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 EI24O14681 340 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 PGRMC2O15173 223 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 ACOX3O15254 700 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 ZSCAN9O15535 394 aaPredicted RBP13.53□□□□□ -0.24
CALD1-207ENST00000430085 B3GALT2O43825 422 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 SDC3O75056 442 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 PRSS23O95084 383 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 NR2F6P10588 404 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 BUD31P41223 144 aaPredicted RBP13.53□□□□□ -0.24
CALD1-207ENST00000430085 CDK9P50750 372 aaKnown RBP13.53□□□□□ -0.24
CALD1-207ENST00000430085 DSTNP60981 165 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 SPIDRQ14159 915 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 DEFB133Q30KQ1 61 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 DEFB134Q4QY38 66 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 SAXO2Q658L1 398 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 TMEM214Q6NUQ4 689 aaKnown RBP13.53□□□□□ -0.24
CALD1-207ENST00000430085 SLC48A1Q6P1K1 146 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 ZDHHC21Q8IVQ6 265 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 MARVELD2Q8N4S9 558 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 DTWD2Q8NBA8 298 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 NFKBIDQ8NI38 313 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 TPD52L3Q96J77 140 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 GLIPR2Q9H4G4 154 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 EPS8L2Q9H6S3 715 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 UCK1Q9HA47 277 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 NTN4Q9HB63 628 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 SIRT3Q9NTG7 399 aaPredicted RBP13.53□□□□□ -0.24
CALD1-207ENST00000430085 ZSCAN32Q9NX65 697 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 SCOCQ9UIL1 159 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 PHF11Q9UIL8 331 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 BAG5Q9UL15 447 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 CACNA1IQ9P0X4 2223 aa13.53□□□□□ -0.24
CALD1-207ENST00000430085 SUV39H1O43463 412 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 CCT3P49368 545 aaKnown RBP13.52□□□□□ -0.24
CALD1-207ENST00000430085 CDK6Q00534 326 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 TP53BP2Q13625 1128 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 BLMHQ13867 455 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 MANEAQ5SRI9 462 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 CEACAM20Q6UY09 585 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 SZRD1Q7Z422 152 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 C6orf120Q7Z4R8 191 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 ZDHHC13Q8IUH4 622 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 ZC3H7AQ8IWR0 971 aaKnown RBP13.52□□□□□ -0.24
CALD1-207ENST00000430085 SLC30A8Q8IWU4 369 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 PSMA8Q8TAA3 256 aa13.52□□□□□ -0.24
CALD1-207ENST00000430085 MAGEE2Q8TD90 523 aaPredicted RBP13.52□□□□□ -0.24
CALD1-207ENST00000430085 HSH2DQ96JZ2 352 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms