RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MAOAP21397 527 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 PIK3CBP42338 1070 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 FOXA1P55317 472 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ZNF33BQ06732 778 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 RUNX2Q13950 521 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 CHI3L2Q15782 390 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ADPRMQ3LIE5 342 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 TCHHL1Q5QJ38 904 aaPredicted RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 FRG2Q64ET8 278 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ZNF324BQ6AW86 544 aaPredicted RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 H3F3CQ6NXT2 135 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 CA13Q8N1Q1 262 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 MTFMTQ96DP5 389 aaKnown RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 FRG2BQ96QU4 278 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 OR1F2PQ96R84 312 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 MTERF1Q99551 399 aaKnown RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 TRMOQ9BU70 441 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 MS4A8Q9BY19 250 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 FARSBQ9NSD9 589 aaKnown RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 NKIRAS1Q9NYS0 192 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 STMN3Q9NZ72 180 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 NOTCH2Q04721 2471 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 FREM3P0C091 2139 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 DYTNA2CJ06 578 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 A8MUA0 341 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 MAGEB17A8MXT2 336 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 TGFBR3LH3BV60 316 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 SH3BGRLO75368 114 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 TGFB1P01137 390 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ICAM2P13598 275 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 BGNP21810 368 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 SERPINB1P30740 379 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 HNRNPFP52597 415 aaKnown RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 OR4D2P58180 307 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 BTN3A2P78410 334 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 PMP22Q01453 160 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 RCN2Q14257 317 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ARL13AQ5H913 290 aaPredicted RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ABHD17BQ5VST6 288 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ABHD13Q7L211 337 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 CRLF3Q8IUI8 442 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 BEST3Q8N1M1 668 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ST6GALNAC3Q8NDV1 305 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 TMEM52Q8NDY8 209 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 METTL6Q8TCB7 284 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 SREK1Q8WXA9 508 aaKnown RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 REPS1Q96D71 796 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 MS4A6EQ96DS6 147 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 PTCHD1Q96NR3 888 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 F2RL3Q96RI0 385 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 HES7Q9BYE0 225 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 OR51B5Q9H339 312 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 KCNK13Q9HB14 408 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 AGPAT4Q9NRZ5 378 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 ANKRD10Q9NXR5 420 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 C19orf25Q9UFG5 118 aaPredicted RBP15.87■□□□□ 0.13
UBE3D-204ENST00000430071 TIMM22Q9Y584 194 aa15.87■□□□□ 0.13
UBE3D-204ENST00000430071 TEX15Q9BXT5 2789 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 MYOCOSA0A1B0GUC4 107 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 MANBAO00462 879 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ATP8B1O43520 1251 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ITM2AO43736 263 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ETHE1O95571 254 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 LDLRP01130 860 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 SERPINE1P05121 402 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ENO1P06733 434 aaKnown RBP15.86■□□□□ 0.13
UBE3D-204ENST00000430071 CYC1P08574 325 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 COL8A1P27658 744 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 HTR6P50406 440 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 TDGF1P3P51864 188 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 SLC26A5P58743 744 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 STXBP1P61764 594 aaKnown RBP15.86■□□□□ 0.13
UBE3D-204ENST00000430071 RPS13P62277 151 aaKnown RBP15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ACTN3Q08043 901 aaPredicted RBP15.86■□□□□ 0.13
UBE3D-204ENST00000430071 SGO1Q5FBB7 561 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ACER2Q5QJU3 275 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 TTC19Q6DKK2 380 aaPredicted RBP15.86■□□□□ 0.13
UBE3D-204ENST00000430071 RPUSD3Q6P087 351 aaKnown RBP15.86■□□□□ 0.13
UBE3D-204ENST00000430071 UBE3DQ7Z6J8 389 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 GAL3ST3Q96A11 431 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 QRFPRQ96P65 431 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 SIGLEC12Q96PQ1 595 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 SLX1AQ9BQ83 275 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ELOVL6Q9H5J4 265 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ZNF395Q9H8N7 513 aaPredicted RBP15.86■□□□□ 0.13
UBE3D-204ENST00000430071 PLEKHB1Q9UF11 243 aaPredicted RBP15.86■□□□□ 0.13
UBE3D-204ENST00000430071 ADGRE2Q9UHX3 823 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 CLDN16Q9Y5I7 305 aa15.86■□□□□ 0.13
UBE3D-204ENST00000430071 CACNA1CQ13936 2221 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 TRAV17A0A0B4J275 112 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 OR5H15A6NDH6 313 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 WIPF3A6NGB9 483 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 FOXE1O00358 373 aaPredicted RBP15.85■□□□□ 0.13
UBE3D-204ENST00000430071 ERI3O43414 337 aaKnown RBP15.85■□□□□ 0.13
UBE3D-204ENST00000430071 PRMT3O60678 531 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 LYPLA1O75608 230 aaPredicted RBP15.85■□□□□ 0.13
UBE3D-204ENST00000430071 CLDN1O95832 211 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 PDYNP01213 254 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 MST1P26927 711 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms