RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	SPOCK3	Q9BQ16	436 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	ALOXE3	Q9BYJ1	711 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	ADGRE2	Q9UHX3	823 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	DMGDH	Q9UI17	866 aa	Known RBP	16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	FBXW2	Q9UKT8	454 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	NPIPA1	Q9UND3	350 aa		16.49	■□□□□ 0.23
MRPL28-203	ENST00000429738	URI1	O94763	535 aa	Predicted RBP	16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	PCNA	P12004	261 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	ZNF24	P17028	368 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	PHB	P35232	272 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	PIK3CB	P42338	1070 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	MAGEA12	P43365	314 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	SERPINB8	P50452	374 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	ALDH18A1	P54886	795 aa	Known RBP	16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	SERTAD2	Q14140	314 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	PFKFB4	Q16877	469 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	LIPJ	Q5W064	366 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	CEP128	Q6ZU80	1094 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	CHSY3	Q70JA7	882 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	SULF2	Q8IWU5	870 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	CYP4Z2P	Q8N1L4	340 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	RNF175	Q8N4F7	328 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	POGLUT1	Q8NBL1	392 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	MORN4	Q8NDC4	146 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	OR14A16	Q8NHC5	309 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	HUS1B	Q8NHY5	278 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	DAZL	Q92904	295 aa	Known RBP	16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	ANKRD9	Q96BM1	317 aa	Predicted RBP	16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	MAGED4	Q96JG8	741 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	CCDC77	Q9BR77	488 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	OR51B5	Q9H339	312 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	CDC42EP4	Q9H3Q1	356 aa	Known RBP	16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	KLF13	Q9Y2Y9	288 aa	Predicted RBP	16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	YARS2	Q9Y2Z4	477 aa	Known RBP	16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	MEMO1	Q9Y316	297 aa		16.48	■□□□□ 0.23
MRPL28-203	ENST00000429738	EML6	Q6ZMW3	1958 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	LRRC14B	A6NHZ5	514 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	UGDH	O60701	494 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	LDB3	O75112	727 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	SH3BGRL	O75368	114 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	IFNA16	P05015	189 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	TYK2	P29597	1187 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	ECHS1	P30084	290 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	SSR4	P51571	173 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	ARFIP1	P53367	373 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	IGLV3-21	P80748	117 aa	Predicted RBP	16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	STX4	Q12846	297 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	AP5B1	Q2VPB7	878 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	TECRL	Q5HYJ1	363 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	OR4C11	Q6IEV9	310 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	METTL2B	Q6P1Q9	378 aa	Known RBP	16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	MDGA2	Q7Z553	956 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	PLD6	Q8N2A8	252 aa	Known RBP	16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	GHDC	Q8N2G8	530 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	TMEM156	Q8N614	296 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	OR8K3	Q8NH51	312 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	C16orf52	Q8NHV5	167 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	SLC44A1	Q8WWI5	657 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	ZNF717	Q9BY31	904 aa	Predicted RBP	16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	DMRT3	Q9NQL9	472 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	MYOT	Q9UBF9	498 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	MTRF1L	Q9UGC7	380 aa	Known RBP	16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	PCDHGA11	Q9Y5H2	935 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	CLCA3P	Q9Y6N3	262 aa		16.47	■□□□□ 0.23
MRPL28-203	ENST00000429738	MYOCOS	A0A1B0GUC4	107 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738		H0YIV9	168 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	KLRC4-KLRK1	H3BQV0	150 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	SAP18	O00422	153 aa	Known RBP	16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	PLPP1	O14494	284 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	GFAP	P14136	432 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	SSR2	P43308	183 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	MEOX1	P50221	254 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	UAP1	Q16222	522 aa	Predicted RBP	16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	KLC3	Q6P597	504 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	C16orf47	Q6ZP98	133 aa	Predicted RBP	16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	FGD2	Q7Z6J4	655 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	CDH24	Q86UP0	819 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	GPALPP1	Q8IXQ4	340 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	ZCCHC7	Q8N3Z6	543 aa	Known RBP	16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	ZNF321P	Q8N8H1	164 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	ZFP62	Q8NB50	900 aa	Predicted RBP	16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	NOA1	Q8NC60	698 aa	Known RBP	16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	C7orf57	Q8NEG2	295 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	WDR20	Q8TBZ3	569 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	CHTF18	Q8WVB6	975 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	SORBS1	Q9BX66	1292 aa	Known RBP	16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	TSPYL1	Q9H0U9	437 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	LIN28A	Q9H9Z2	209 aa	Known RBP	16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	MCCC2	Q9HCC0	563 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	MS4A12	Q9NXJ0	267 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	ANGPTL3	Q9Y5C1	460 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	SPACA6	W5XKT8	324 aa		16.46	■□□□□ 0.23
MRPL28-203	ENST00000429738	FGF17	O60258	216 aa		16.45	■□□□□ 0.22
MRPL28-203	ENST00000429738	OR2J2	O76002	312 aa		16.45	■□□□□ 0.22
MRPL28-203	ENST00000429738	CPN2	P22792	545 aa		16.45	■□□□□ 0.22
MRPL28-203	ENST00000429738	HK2	P52789	917 aa		16.45	■□□□□ 0.22
MRPL28-203	ENST00000429738	HSF1	Q00613	529 aa		16.45	■□□□□ 0.22
MRPL28-203	ENST00000429738	TLE4	Q04727	773 aa		16.45	■□□□□ 0.22
MRPL28-203	ENST00000429738	SLAMF1	Q13291	335 aa		16.45	■□□□□ 0.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms