RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 KIAA0513O60268 411 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ALPLP05186 524 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 RHOCP08134 193 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ATXN8OSP0DMR3 200 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 CYP2B6P20813 491 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 S100A11P31949 105 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 GRK4P32298 578 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 MRPL19P49406 292 aaKnown RBP7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 GSG1LQ6UXU4 331 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 LRRC56Q8IYG6 542 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 BORCS6Q96GS4 357 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 TRIB3Q96RU7 358 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 MGLLQ99685 303 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 TAS2R10Q9NYW0 307 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 VWA7Q9Y334 891 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 SLC6A5Q9Y345 797 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 AHDC1Q5TGY3 1603 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 C2CD4BA6NLJ0 364 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 RIIAD1A6NNX1 92 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 DCLK1O15075 740 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 SSX4O60224 188 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ACTA2P62736 377 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ACTG2P63267 376 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 NFKB2Q00653 900 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 KCNAB2Q13303 367 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 PCLAFQ15004 111 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 MICAQ29983 383 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ZDHHC20Q5W0Z9 365 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 PLPPR4Q7Z2D5 763 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 GPR156Q8NFN8 814 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 CST11Q9H112 138 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 CERS4Q9HA82 394 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 PCDH10Q9P2E7 1040 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 PADI2Q9Y2J8 665 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 NPFFR2Q9Y5X5 522 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 A0A0A6YYH2 397 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 A6NJ64 397 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 TMEM63AO94886 807 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 NMBRP28336 390 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ASPAP45381 313 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 TRAM2Q15035 370 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 RAB11BQ15907 218 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 MTSS1LQ765P7 747 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 SHFQ7M4L6 423 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 DAW1Q8N136 415 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 RSPRY1Q96DX4 576 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 SYT4Q9H2B2 425 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 POU2F3Q9UKI9 436 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ERVK-19Q9WJR5 959 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 LOC285095A0A1B0GVY8 99 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ACOT7O00154 380 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 FOSL2P15408 326 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 PITPNBP48739 271 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ZNF600Q6ZNG1 722 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 ZNF454Q8N9F8 522 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 OR4L1Q8NH43 312 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 COQ8AQ8NI60 647 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 METTL9Q9H1A3 318 aa7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 TFB2MQ9H5Q4 396 aaKnown RBP7.25□□□□□ -1.25
SYNPO2-202ENST00000429713 EVI2BP34910 448 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 HCAR3P49019 387 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 C14orf28Q4W4Y0 310 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 OLFML2AQ68BL7 652 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 FBXL19Q6PCT2 694 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 GTPBP8Q8N3Z3 284 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 BRI3BPQ8WY22 251 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 MFSD3Q96ES6 412 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 PARK7Q99497 189 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 OR51M1Q9H341 326 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 TREM1Q9NP99 234 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 ARHGEF4Q9NR80 690 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 COPS3Q9UNS2 423 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 PTPRFP10586 1907 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 A0A1W2PQ09 198 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 SNRPGP15A8MWD9 76 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 D6RAR5 112 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 TNFRSF11BO00300 401 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 RGS9O75916 674 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 IFNA6P05013 189 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 JUNDP17535 347 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 C5AR1P21730 350 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 DGKAP23743 735 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 GPX6P59796 221 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 SPIN4Q56A73 249 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 RNASE10Q5GAN6 216 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 CFAP77Q6ZQR2 320 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 LRRC52Q8N7C0 313 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 OR51D1Q8NGF3 324 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 SELENOMQ8WWX9 145 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 SMPDL3AQ92484 453 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 TBC1D20Q96BZ9 403 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 TBC1D17Q9HA65 648 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 ARL15Q9NXU5 204 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 VNN3Q9NY84 501 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 MAFBQ9Y5Q3 323 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 WASHC1A8K0Z3 465 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 ISM1B1AKI9 464 aa7.24□□□□□ -1.25
SYNPO2-202ENST00000429713 POP7O75817 140 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms