RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 VTI1BQ9UEU0 232 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 SPACA6W5XKT8 324 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 ARHGAP21Q5T5U3 1957 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 K7EPI3 171 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 LTA4HP09960 611 aaKnown RBP15.85■□□□□ 0.13
TRIM39-209ENST00000428728 HIST1H1TP22492 207 aaPredicted RBP15.85■□□□□ 0.13
TRIM39-209ENST00000428728 CPN2P22792 545 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 CASQ1P31415 396 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 KIR3DL1P43629 444 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 NR0B1P51843 470 aaKnown RBP15.85■□□□□ 0.13
TRIM39-209ENST00000428728 IRF9Q00978 393 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 SERTAD2Q14140 314 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 AP5B1Q2VPB7 878 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 ZDHHC24Q6UX98 284 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 MYLK4Q86YV6 388 aaPredicted RBP15.85■□□□□ 0.13
TRIM39-209ENST00000428728 GPALPP1Q8IXQ4 340 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 LAS2Q8IYD9 372 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 MORN4Q8NDC4 146 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 OR2M7Q8NG81 312 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 OR7G3Q8NG95 312 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 CA5BP1Q8WTZ4 195 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 KCTD4Q8WVF5 259 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 UBE2E3Q969T4 207 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 NXNL1Q96CM4 212 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 LURAP1Q96LR2 239 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 DEFB127Q9H1M4 99 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 OR51B5Q9H339 312 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 CSMD1Q96PZ7 3565 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 EXPH5Q8NEV8 1989 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 FREM3P0C091 2139 aa15.85■□□□□ 0.13
TRIM39-209ENST00000428728 INTS1Q8N201 2190 aaKnown RBP15.85■□□□□ 0.13
TRIM39-209ENST00000428728 FBN2P35556 2912 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 NINQ8N4C6 2090 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 ACOT7O00154 380 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 SCELO95171 688 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 ELAVL4P26378 380 aaKnown RBP15.84■□□□□ 0.13
TRIM39-209ENST00000428728 CRABP2P29373 138 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 CASP2P42575 452 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 RAP1GDS1P52306 607 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 RNF4P78317 190 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 CAV1Q03135 178 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 NAB1Q13506 487 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 E2F2Q14209 437 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 ZNF750Q32MQ0 723 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 TMEM35AQ53FP2 167 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 KHDRBS2Q5VWX1 349 aaKnown RBP15.84■□□□□ 0.13
TRIM39-209ENST00000428728 GRHL2Q6ISB3 625 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 CEP128Q6ZU80 1094 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 CHSY3Q70JA7 882 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 OR4N5Q8IXE1 308 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 MARVELD2Q8N4S9 558 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 TEX9Q8N6V9 391 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 ANKRD9Q96BM1 317 aaPredicted RBP15.84■□□□□ 0.13
TRIM39-209ENST00000428728 CMTM7Q96FZ5 175 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 COQ3Q9NZJ6 369 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 COPS7AQ9UBW8 275 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 ANGPTL3Q9Y5C1 460 aa15.84■□□□□ 0.13
TRIM39-209ENST00000428728 FGF17O60258 216 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 ETHE1O95571 254 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 COX7A2P14406 83 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 PPIAP62937 165 aaKnown RBP15.83■□□□□ 0.12
TRIM39-209ENST00000428728 UAP1Q16222 522 aaPredicted RBP15.83■□□□□ 0.12
TRIM39-209ENST00000428728 ARHGAP11AQ6P4F7 1023 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 SYT10Q6XYQ8 523 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 RTL4Q6ZR62 310 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 CENPLQ8N0S6 344 aaPredicted RBP15.83■□□□□ 0.12
TRIM39-209ENST00000428728 ZNF295-AS1Q8N0V1 137 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 HUS1BQ8NHY5 278 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 SCYL1Q96KG9 808 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 DGAT2Q96PD7 388 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 TTTY12Q9BZ98 90 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 DMRT3Q9NQL9 472 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 HRH3Q9Y5N1 445 aa15.83■□□□□ 0.12
TRIM39-209ENST00000428728 ESYT3A0FGR9 886 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 LRRC14BA6NHZ5 514 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 SYCE1LA8MT33 242 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 PLPP1O14494 284 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 ZNF354AO60765 605 aaPredicted RBP15.82■□□□□ 0.12
TRIM39-209ENST00000428728 PRKRAO75569 313 aaKnown RBP15.82■□□□□ 0.12
TRIM39-209ENST00000428728 MTHFD2P13995 350 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 GFAPP14136 432 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 EPB42P16452 691 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 SERPINB1P30740 379 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 SLAMF1Q13291 335 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 MROH9Q5TGP6 573 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 OR4C11Q6IEV9 310 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 GK5Q6ZS86 529 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 RPRMLQ8N4K4 120 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 DOK4Q8TEW6 326 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 ZNF721Q8TF20 911 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 MTERF1Q99551 399 aaKnown RBP15.82■□□□□ 0.12
TRIM39-209ENST00000428728 CENPKQ9BS16 269 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 TP63Q9H3D4 680 aaPredicted RBP15.82■□□□□ 0.12
TRIM39-209ENST00000428728 ACTR8Q9H981 624 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 PLSCR2Q9NRY7 297 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 ACOT9Q9Y305 439 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 LIPGQ9Y5X9 500 aa15.82■□□□□ 0.12
TRIM39-209ENST00000428728 A0A087X1B8 175 aa15.81■□□□□ 0.12
TRIM39-209ENST00000428728 FAM90A27PA6NNH2 459 aa15.81■□□□□ 0.12
TRIM39-209ENST00000428728 NPIPA2E9PIF3 369 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms