RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 PGRMC2O15173 223 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 SCELO95171 688 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 HSD17B7P56937 341 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 TAS2R50P59544 299 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 RHDQ02161 417 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 TNFRSF17Q02223 184 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 UGT3A2Q3SY77 523 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 DCAF10Q5QP82 559 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 NDUFAF5Q5TEU4 345 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 QSOX2Q6ZRP7 698 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 AMER2Q8N7J2 671 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 PLPP5Q8NEB5 264 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 SNRNP27Q8WVK2 155 aaKnown RBP13.67□□□□□ -0.22
SGCE-204ENST00000428696 TANKQ92844 425 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 NACC2Q96BF6 587 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 TUBGCP3Q96CW5 907 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 TRIM55Q9BYV6 548 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 C1orf109Q9NX04 203 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 TEX10Q9NXF1 929 aaPredicted RBP13.67□□□□□ -0.22
SGCE-204ENST00000428696 GIMAP2Q9UG22 337 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.67□□□□□ -0.22
SGCE-204ENST00000428696 MMACHCQ9Y4U1 282 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 MGAQ8IWI9 3026 aa13.67□□□□□ -0.22
SGCE-204ENST00000428696 A8MUI8 341 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 RSL1D1O76021 490 aaKnown RBP13.66□□□□□ -0.22
SGCE-204ENST00000428696 SNUPNO95149 360 aaKnown RBP13.66□□□□□ -0.22
SGCE-204ENST00000428696 AIFM1O95831 613 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 ITGB2P05107 769 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 PPP2R1BP30154 601 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 TIA1P31483 386 aaKnown RBP eCLIP13.66□□□□□ -0.22
SGCE-204ENST00000428696 POLE2P56282 527 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 RAE1P78406 368 aaKnown RBP13.66□□□□□ -0.22
SGCE-204ENST00000428696 FOLH1Q04609 750 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 BTBD16Q32M84 506 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 MRM1Q6IN84 353 aaKnown RBP13.66□□□□□ -0.22
SGCE-204ENST00000428696 NOXRED1Q6NXP6 359 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 PAPD4Q6PIY7 484 aaKnown RBP13.66□□□□□ -0.22
SGCE-204ENST00000428696 TMEM205Q6UW68 189 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 MMP21Q8N119 569 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 OR2T11Q8NH01 316 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 DOK4Q8TEW6 326 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 PPWD1Q96BP3 646 aaKnown RBP13.66□□□□□ -0.22
SGCE-204ENST00000428696 TM4SF18Q96CE8 201 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 THOC3Q96J01 351 aaKnown RBP13.66□□□□□ -0.22
SGCE-204ENST00000428696 SORT1Q99523 831 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 LPAR4Q99677 370 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 FAIM2Q9BWQ8 316 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 NUF2Q9BZD4 464 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 RIC8BQ9NVN3 520 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 G3BP2Q9UN86 482 aaKnown RBP13.66□□□□□ -0.22
SGCE-204ENST00000428696 DLGAP4Q9Y2H0 992 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 SCN2AQ99250 2005 aa13.66□□□□□ -0.22
SGCE-204ENST00000428696 IGHV1-45A0A0A0MS14 117 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 SERTM1A2A2V5 107 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 MKRN2OSH3BPM6 223 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 OR10H2O60403 315 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 ERAL1O75616 437 aaKnown RBP13.65□□□□□ -0.22
SGCE-204ENST00000428696 HPP00738 406 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 COX6A1P12074 109 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 PIK3R1P27986 724 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 RPL38P63173 70 aaKnown RBP13.65□□□□□ -0.22
SGCE-204ENST00000428696 C2orf80Q0P641 193 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 AIMP2Q13155 320 aaKnown RBP13.65□□□□□ -0.22
SGCE-204ENST00000428696 ATP6AP1LQ52LC2 224 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 RFTN2Q52LD8 501 aaPredicted RBP13.65□□□□□ -0.22
SGCE-204ENST00000428696 Q6ZSR9 355 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 CRLF3Q8IUI8 442 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 HOMEZQ8IX15 550 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 KBTBD2Q8IY47 623 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 RAB3IL1Q8TBN0 382 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 C16orf78Q8WTQ4 265 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 C19orf60Q96EN9 201 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 RBM18Q96H35 190 aaKnown RBP13.65□□□□□ -0.22
SGCE-204ENST00000428696 C3orf30Q96M34 536 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 DGAT2Q96PD7 388 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 ZNF700Q9H0M5 742 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 C5AR2Q9P296 337 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 MCM8Q9UJA3 840 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 PSME2Q9UL46 239 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 CLCA3PQ9Y6N3 262 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 ITPR1Q14643 2758 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 LOC400499M0QZD8 3231 aa13.65□□□□□ -0.22
SGCE-204ENST00000428696 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 PCDH17O14917 1159 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 FGF17O60258 216 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 GPR75O95800 540 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 JUNP05412 331 aaKnown RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 CELA2AP08217 269 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 IL3P08700 152 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 PGDP52209 483 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 SERTAD2Q14140 314 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 LY6DQ14210 128 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 PCOLCEQ15113 449 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 LINC00303Q3SY05 128 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 FAM180BQ6P0A1 224 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 TMEM132CQ8N3T6 1108 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 GALNT16Q8N428 558 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 FNDC5Q8NAU1 212 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms