RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TMEM114B3SHH9 223 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 FAM227AF5H4B4 570 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 CYR61O00622 381 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 B3GALT2O43825 422 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 EEDO75530 441 aaKnown RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 SEMA3DO95025 777 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 HSD3B1P14060 373 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 IL10P22301 178 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 HIST1H1TP22492 207 aaPredicted RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 GRK2P25098 689 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 HSD3B2P26439 372 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 CERS1P27544 350 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 FOLR3P41439 243 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 TSFMP43897 325 aaKnown RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 XCR1P46094 333 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 SLC1A6P48664 564 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 EMP2P54851 167 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 UCNP55089 124 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 LIM2P55344 173 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 TMPRSS3P57727 454 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 PPP2R2AP63151 447 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 HMGCS1Q01581 520 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 KLC1Q07866 573 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 TGM3Q08188 693 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 BST1Q10588 318 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 CSTF3Q12996 717 aaKnown RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 SLAMF1Q13291 335 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 IL10RAQ13651 578 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 UGT8Q16880 541 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 AP5B1Q2VPB7 878 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ATP1A1-AS1Q5TC04 95 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 KANK2Q63ZY3 851 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 CLEC6AQ6EIG7 209 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 C19orf48Q6RUI8 117 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 RNF165Q6ZSG1 346 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 SHISA6Q6ZSJ9 500 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 Q6ZSR9 355 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 PRSS58Q8IYP2 241 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ZCCHC7Q8N3Z6 543 aaKnown RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 PLPP5Q8NEB5 264 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 PPP1R14CQ8TAE6 165 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 SREK1Q8WXA9 508 aaKnown RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 STARD8Q92502 1023 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF75CPQ92670 426 aaPredicted RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 C11orf24Q96F05 449 aaPredicted RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 CRELD1Q96HD1 420 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 KCNC2Q96PR1 638 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 SORT1Q99523 831 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 MAPKAP1Q9BPZ7 522 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 MESP1Q9BRJ9 268 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 MRPL1Q9BYD6 325 aaKnown RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ACPTQ9BZG2 426 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ROGDIQ9GZN7 287 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ACBD3Q9H3P7 528 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 PRORYQ9H606 182 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 SOX17Q9H6I2 414 aaPredicted RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 C14orf105Q9NVL8 296 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 VPS29Q9UBQ0 182 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 HAO1Q9UJM8 370 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 NXT1Q9UKK6 140 aaKnown RBP6.98□□□□□ -1.29
LINC01049-201ENST00000426840 DAPP1Q9UN19 280 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 SLC12A4Q9UP95 1085 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 RAP2CQ9Y3L5 183 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ASB4Q9Y574 426 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 DNAJC15Q9Y5T4 150 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 MED13Q9UHV7 2174 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 FRYQ5TBA9 3013 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ASPMQ8IZT6 3477 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 A0A088AWK7 358 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 A0A0A6YYD5 115 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 IDSB3KWA1 339 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 TMEM233B4DJY2 109 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 NPIPB8E9PQR5 432 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 SLC28A1O00337 649 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 DYNC1I1O14576 645 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 KLF11O14901 512 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 TMPRSS11DO60235 418 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 SNNO75324 88 aaPredicted RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 CRCPO75575 148 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 KLK1P06870 262 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 LINC00032P0C843 101 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 NEFHP12036 1026 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 RNH1P13489 461 aaKnown RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF10P21506 573 aaPredicted RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 VAMP1P23763 118 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 MMP11P24347 488 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 TPP2P29144 1249 aaPredicted RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 SSR2P43308 183 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 RAP1GDS1P52306 607 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 HNRNPFP52597 415 aaKnown RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 HNRNPH2P55795 449 aaKnown RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 RAB38P57729 211 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 SKP1P63208 163 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 RAE1P78406 368 aaKnown RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 BTG2P78543 158 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 MC1RQ01726 317 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 RHAGQ02094 409 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 BTKQ06187 659 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 KIAA0040Q15053 153 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 COL28A1Q2UY09 1125 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms