RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 RFPL3SP0C7P2 107 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 HNRNPH1P31943 449 aaKnown RBP13.51□□□□□ -0.25
PDAP1-202ENST00000426447 HPDP32754 393 aaPredicted RBP13.51□□□□□ -0.25
PDAP1-202ENST00000426447 WNT3P56703 355 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 FBXL19-AS1Q494R0 122 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 PRAMEF20Q5VT98 475 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 TRIM40Q6P9F5 258 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 TMIGD1Q6UXZ0 262 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 P3H2Q8IVL5 708 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■■■■□ 23
PDAP1-202ENST00000426447 NAXEQ8NCW5 288 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 SLC2A12Q8TD20 617 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 SLC6A15Q9H2J7 730 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 PRM3Q9NNZ6 103 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 ACKR4Q9NPB9 350 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 TRMT1Q9NXH9 659 aaKnown RBP13.51□□□□□ -0.25
PDAP1-202ENST00000426447 ANKDD1BA6NHY2 528 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 CLCA1A8K7I4 914 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 CYR61O00622 381 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 AHSGP02765 367 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 C1GALT1C1LP0DN25 315 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 PCSK6P29122 969 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 CEACAM8P31997 349 aaPredicted RBP13.5□□□□□ -0.25
PDAP1-202ENST00000426447 TIMP3P35625 211 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 AGFG1P52594 562 aaKnown RBP13.5□□□□□ -0.25
PDAP1-202ENST00000426447 MTTPP55157 894 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 LIM2P55344 173 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 TBL3Q12788 808 aaKnown RBP13.5□□□□□ -0.25
PDAP1-202ENST00000426447 SERTAD2Q14140 314 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 POU4F3Q15319 338 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 SF3B4Q15427 424 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDAP1-202ENST00000426447 MPEG1Q2M385 716 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 PIGGQ5H8A4 983 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 LACC1Q8IV20 430 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 KRT78Q8N1N4 520 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 SLC22A8Q8TCC7 542 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 KIAA1191Q96A73 305 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 SIGLEC10Q96LC7 697 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 SERINC2Q96SA4 455 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 CSF3RQ99062 836 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 EGFL8Q99944 293 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
PDAP1-202ENST00000426447 ZNF703Q9H7S9 590 aaPredicted RBP13.5□□□□□ -0.25
PDAP1-202ENST00000426447 DAPP1Q9UN19 280 aa13.5□□□□□ -0.25
PDAP1-202ENST00000426447 DNAJC13O75165 2243 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 EEF1E1-BLOC1S5C9J1V9 151 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 CES2O00748 559 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 EEF1E1O43324 174 aaKnown RBP13.49□□□□□ -0.25
PDAP1-202ENST00000426447 LDB3O75112 727 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 COX7A2P14406 83 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 GNAZP19086 355 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 CD53P19397 219 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 CERS1P27544 350 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 GABRB3P28472 473 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 PGGT1BP53609 377 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 DUSP8Q13202 625 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 SLBPQ14493 270 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDAP1-202ENST00000426447 ACSF3Q4G176 576 aaPredicted RBP13.49□□□□□ -0.25
PDAP1-202ENST00000426447 TMEM139Q8IV31 216 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 VWA5B2Q8N398 1253 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 FAM13CQ8NE31 585 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 OR2L5Q8NG80 312 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 PAQR8Q8TEZ7 354 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 HSPBAP1Q96EW2 488 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 QRFPRQ96P65 431 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 PPANQ9NQ55 473 aaKnown RBP13.49□□□□□ -0.25
PDAP1-202ENST00000426447 QPCTLQ9NXS2 382 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 VWA7Q9Y334 891 aa13.49□□□□□ -0.25
PDAP1-202ENST00000426447 FLNAP21333 2647 aaKnown RBP13.49□□□□□ -0.25
PDAP1-202ENST00000426447 DYRK3O43781 588 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 CLEC3AO75596 197 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 TRAPPC6AO75865 159 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 WDR47O94967 919 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 GOSR1O95249 250 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 ETHE1O95571 254 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 CCDC175P0C221 793 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 PGAM1P18669 254 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 GDF1P27539 372 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 GSTM2P28161 218 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 ZNF136P52737 540 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 ID2Q02363 134 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 TGM3Q08188 693 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 ZNF791Q3KP31 576 aaPredicted RBP13.48□□□□□ -0.25
PDAP1-202ENST00000426447 PM20D2Q8IYS1 436 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 AGGF1Q8N302 714 aaeCLIP13.48□□□□□ -0.25
PDAP1-202ENST00000426447 LRRC25Q8N386 305 aaPredicted RBP13.48□□□□□ -0.25
PDAP1-202ENST00000426447 RASGEF1CQ8N431 466 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 ZNF721Q8TF20 911 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 TIMP4Q99727 224 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 CNIH4Q9P003 139 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 SPACA6W5XKT8 324 aa13.48□□□□□ -0.25
PDAP1-202ENST00000426447 KDM4EB2RXH2 506 aaPredicted RBP13.47□□□□□ -0.25
PDAP1-202ENST00000426447 CASKO14936 926 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SMAD7O15105 426 aaKnown RBP13.47□□□□□ -0.25
PDAP1-202ENST00000426447 CTSSP25774 331 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SERPINB3P29508 390 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 CXCR5P32302 372 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 OPRM1P35372 400 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 GDF5P43026 501 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms