RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZNF37AP17032 561 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 GABRB3P28472 473 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ADSLP30566 484 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SERPINB1P30740 379 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DNASE1L1P49184 302 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ASCL1P50553 236 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TIAL1Q01085 375 aaKnown RBP eCLIP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 IRF8Q02556 426 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CYP1B1Q16678 543 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TMEM35AQ53FP2 167 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CDKL4Q5MAI5 379 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RNASEH2BQ5TBB1 312 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 HLA-DQA1Q5Y7H0 255 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TTC27Q6P3X3 843 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ABHD17CQ6PCB6 329 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SCIMPQ6UWF3 145 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TAGAPQ8N103 731 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 NUBPLQ8TB37 319 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SLC2A12Q8TD20 617 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PTPMT1Q8WUK0 201 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TANKQ92844 425 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RNASE6Q93091 150 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DTNBP1Q96EV8 351 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 HSPBAP1Q96EW2 488 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PWWP2AQ96N64 755 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 YIPF4Q9BSR8 244 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 WDR41Q9HAD4 459 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 POPDC3Q9HBV1 291 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ACKR4Q9NPB9 350 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TUBA8Q9NY65 449 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ZNF223Q9UK11 482 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ATG4BQ9Y4P1 393 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PDZD2O15018 2839 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 C15orf38-AP3S2A0A0A6YYH1 394 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PINLYPA6NC86 204 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NCF1BA6NI72 391 aaPredicted RBP11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TMEM200CA6NKL6 621 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NCF1CA8MVU1 366 aaPredicted RBP11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CDC7O00311 574 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CYR61O00622 381 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PROM1O43490 865 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CDH16O75309 829 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 STK16O75716 305 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TRAPPC6AO75865 159 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 EPPINO95925 133 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NCF1P14598 390 aaPredicted RBP11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 BMP5P22003 454 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 HNRNPH1P31943 449 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RAP1GDS1P52306 607 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ARL4CP56559 192 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PHEXP78562 749 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PLIN5Q00G26 463 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MGAT5Q09328 741 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ASPHQ12797 758 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DAZAP2Q15038 168 aaPredicted RBP11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TOMM20Q15388 145 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 C6orf163Q5TEZ5 329 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SULT1C3Q6IMI6 304 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SBSNQ6UWP8 590 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 C16orf47Q6ZP98 133 aaPredicted RBP11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PACS2Q86VP3 889 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CDC20BQ86Y33 519 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LACC1Q8IV20 430 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 FAM13CQ8NE31 585 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NEIL3Q8TAT5 605 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NRGNQ92686 78 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CDKL2Q92772 493 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MBD6Q96DN6 1003 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SENP5Q96HI0 755 aaPredicted RBP11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 QRFPRQ96P65 431 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DOHHQ9BU89 302 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CD274Q9NZQ7 290 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CRIM1Q9NZV1 1036 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PLEKHA6Q9Y2H5 1048 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 FAM215AQ9Y5M1 114 aa11.33□□□□□ -0.6
HLA-DQB3-203ENST00000425319 FAM95CA0A1B0GW59 222 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NPEPPSL1A6NEC2 478 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PRKNO60260 465 aaPredicted RBP11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 OR10H2O60403 315 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LDB3O75112 727 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SNX4O95219 450 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 EPXP11678 715 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 KRT15P19012 456 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 GDF1P27539 372 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CERS1P27544 350 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 OPRM1P35372 400 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TIMP3P35625 211 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PIGAP37287 484 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 BUD31P41223 144 aaPredicted RBP11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ELK3P41970 407 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 GDF5P43026 501 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SSR2P43308 183 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MASP1P48740 699 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TMED10P49755 219 aaKnown RBP11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DLX5P56178 289 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NRG3P56975 720 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ATP6V0D1P61421 351 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 EEF1A1P68104 462 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms