RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ZNF236Q9UL36 1845 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 SHISA3A0PJX4 238 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 PTGESO14684 152 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 SNAI1O95863 264 aaPredicted RBP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 HLA-DPA1P20036 260 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 CLDN20P56880 219 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 DCDC1P59894 354 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 LRRC74AQ0VAA2 488 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 EFEMP1Q12805 493 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ANGPT1Q15389 498 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 RAB41Q5JT25 222 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 LRIF1Q5T3J3 769 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ARMC12Q5T9G4 340 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 MLIPQ5VWP3 458 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 MZT2BQ6NZ67 158 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 LRFN4Q6PJG9 635 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 TMEM91Q6ZNR0 172 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 FAM92BQ6ZTR7 304 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 SLC5A11Q8WWX8 675 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 PIGKQ92643 395 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 C1QTNF3Q9BXJ4 246 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 CDCA4Q9BXL8 241 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 CLEC4MQ9H2X3 399 aaPredicted RBP10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 ANKRA2Q9H9E1 313 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 HRH3Q9Y5N1 445 aa10.79□□□□□ -0.68
SEC61A1-202ENST00000424880 HYKKA2RU49 373 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 SEMG1P04279 462 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 CTPS1P17812 591 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 WARSP23381 471 aaKnown RBP10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 ETV5P41161 510 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 GPR15P49685 360 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 RASSF6Q6ZTQ3 369 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 DENND6BQ8NEG7 585 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 OR4K1Q8NGD4 311 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 SEC22CQ9BRL7 303 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 TMEM245Q9H330 911 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 CCSER2Q9H7U1 834 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 CTPS2Q9NRF8 586 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 MRPL39Q9NYK5 338 aaKnown RBP10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 MAPRE3Q9UPY8 281 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 PADI2Q9Y2J8 665 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 FGF10O15520 208 aaPredicted RBP10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 TLX2O43763 284 aaPredicted RBP10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 TFPIP10646 304 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 DRD5P21918 477 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 ITPKAP23677 461 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 RAB14P61106 215 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 MICAQ29983 383 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 DCAF4L1Q3SXM0 396 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 KLHL12Q53G59 568 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 PTRHD1Q6GMV3 140 aaKnown RBP10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 FAM151BQ6UXP7 276 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 GPR155Q7Z3F1 870 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 IFNL1Q8IU54 200 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 SYT12Q8IV01 421 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 RASGRP3Q8IV61 690 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 SLC30A8Q8IWU4 369 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 TAGAPQ8N103 731 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 SMARCD1Q96GM5 515 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 MARVELD1Q9BSK0 173 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 POLR1EQ9GZS1 481 aaKnown RBP10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 TVP23BQ9NYZ1 205 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 GPR52Q9Y2T5 361 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 PCDHGA9Q9Y5G4 932 aaKnown RBP10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 CDH10Q9Y6N8 788 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 HTTP42858 3142 aa10.78□□□□□ -0.68
SEC61A1-202ENST00000424880 IQCMA0A1B0GVH7 501 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 A0A1W2PPL8 197 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 FAM157BP0CG42 384 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 GBX2P52951 348 aaPredicted RBP10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 KIAA1024LP59773 190 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 ZNF33AQ06730 810 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 GAB1Q13480 694 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 GPR176Q14439 515 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 EIF4HQ15056 248 aaKnown RBP10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 TEAD4Q15561 434 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 ATP13A5Q4VNC0 1218 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 CLLU1Q5K131 121 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 MANEALQ5VSG8 457 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 GPR139Q6DWJ6 353 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 OR6K2Q8NGY2 324 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 PTP4A1Q93096 173 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 ZC3HAV1LQ96H79 300 aaKnown RBP10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 ART5Q96L15 291 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 SLC6A18Q96N87 628 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 ABCG5Q9H222 651 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 IFT46Q9NQC8 304 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 SLCO1C1Q9NYB5 712 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 SH3BP4Q9P0V3 963 aa10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 ZNF624Q9P2J8 865 aaPredicted RBP10.77□□□□□ -0.68
SEC61A1-202ENST00000424880 OGNP20774 298 aaKnown RBP10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 CCR6P51684 374 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 FBXL22Q6P050 247 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 SERPINA11Q86U17 422 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 LHFPL3Q86UP9 236 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 COQ8AQ8NI60 647 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 POP5Q969H6 163 aaKnown RBP10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 WDR89Q96FK6 387 aaPredicted RBP10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 EPYCQ99645 322 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms