RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 SCUBE1Q8IWY4 988 aa17.59■□□□□ 0.41
MCF2L-214ENST00000423251 TRIM42Q8IWZ5 723 aa17.59■□□□□ 0.41
MCF2L-214ENST00000423251 KIRREL3Q8IZU9 778 aa17.59■□□□□ 0.41
MCF2L-214ENST00000423251 C1orf52Q8N6N3 182 aaKnown RBP17.59■□□□□ 0.41
MCF2L-214ENST00000423251 FAM47BQ8NA70 645 aa17.59■□□□□ 0.41
MCF2L-214ENST00000423251 TMEM52Q8NDY8 209 aa17.59■□□□□ 0.41
MCF2L-214ENST00000423251 RAB3IL1Q8TBN0 382 aa17.59■□□□□ 0.41
MCF2L-214ENST00000423251 C11orf24Q96F05 449 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-214ENST00000423251 MESP1Q9BRJ9 268 aa17.59■□□□□ 0.41
MCF2L-214ENST00000423251 ILKAPQ9H0C8 392 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-214ENST00000423251 CCL27Q9Y4X3 112 aa17.59■□□□□ 0.41
MCF2L-214ENST00000423251 A0A1W2PR48 441 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 TCRBV16S1A1N1A0A5B0 115 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 ATP8B1O43520 1251 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 RGS14O43566 566 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 GUCY1B2O75343 617 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 RSL1D1O76021 490 aaKnown RBP17.58■□□□□ 0.4
MCF2L-214ENST00000423251 GBAP04062 536 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 MAOAP21397 527 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 PRPH2P23942 346 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 BUD31P41223 144 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-214ENST00000423251 HNRNPFP52597 415 aaKnown RBP17.58■□□□□ 0.4
MCF2L-214ENST00000423251 MAPK12P53778 367 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 TRA2BP62995 288 aaKnown RBP17.58■□□□□ 0.4
MCF2L-214ENST00000423251 TNFRSF17Q02223 184 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 ACTN3Q08043 901 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-214ENST00000423251 ACSM2AQ08AH3 577 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 SLC13A2Q13183 592 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 SPDYAQ5MJ70 313 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 ACSM2BQ68CK6 577 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 GALNT18Q6P9A2 607 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 LANCL3Q6ZV70 420 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 EFCAB3Q8N7B9 438 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 CLEC1AQ8NC01 280 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 TWIST2Q8WVJ9 160 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 TANKQ92844 425 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 TSLPQ969D9 159 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 APIPQ96GX9 242 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 CCT7Q99832 543 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 TUBB6Q9BUF5 446 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 C20orf27Q9GZN8 174 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 TUBB1Q9H4B7 451 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 RPF2Q9H7B2 306 aaKnown RBP17.58■□□□□ 0.4
MCF2L-214ENST00000423251 ZNF395Q9H8N7 513 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-214ENST00000423251 NECTIN3Q9NQS3 549 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 MCM8Q9UJA3 840 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 HAO1Q9UJM8 370 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 FIS1Q9Y3D6 152 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 RAP2CQ9Y3L5 183 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 NUP210LQ5VU65 1888 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 PCSK5Q92824 1860 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 DOPEY2Q9Y3R5 2298 aa17.58■□□□□ 0.4
MCF2L-214ENST00000423251 SCN2AQ99250 2005 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 NAV2Q8IVL1 2488 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 NSG1A0A0A6YYJ2 146 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 LYPLA1O75608 230 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-214ENST00000423251 ICAM2P13598 275 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 CCL11P51671 97 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 OR4D2P58180 307 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 EEF1A2Q05639 463 aaKnown RBP17.57■□□□□ 0.4
MCF2L-214ENST00000423251 BTKQ06187 659 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 BST1Q10588 318 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 BIKQ13323 160 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 PCOLCEQ15113 449 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 CPZQ66K79 652 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 ATG16L1Q676U5 607 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 C18orf63Q68DL7 685 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 Q6ZSR9 355 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 FAM76AQ8TAV0 307 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 IMMP1LQ96LU5 166 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 SORT1Q99523 831 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 TRIM55Q9BYV6 548 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 EPN3Q9H201 632 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 MANSC1Q9H8J5 431 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 WDR41Q9HAD4 459 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 PFDN4Q9NQP4 134 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 RIC8BQ9NVN3 520 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 THAP1Q9NVV9 213 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 TUBD1Q9UJT1 453 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 CLDN16Q9Y5I7 305 aa17.57■□□□□ 0.4
MCF2L-214ENST00000423251 TMEM233B4DJY2 109 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 CEACAM4O75871 244 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 LINC00032P0C843 101 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 PPP2R1BP30154 601 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 RPL14P50914 215 aaKnown RBP17.56■□□□□ 0.4
MCF2L-214ENST00000423251 PPP2R2AP63151 447 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 RAE1P78406 368 aaKnown RBP17.56■□□□□ 0.4
MCF2L-214ENST00000423251 CHAF1BQ13112 559 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 SERTAD2Q14140 314 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 SFT2D3Q587I9 215 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 AGR3Q8TD06 166 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 ANKRD9Q96BM1 317 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-214ENST00000423251 TM4SF18Q96CE8 201 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 LPAR4Q99677 370 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 WDR77Q9BQA1 342 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-214ENST00000423251 ZNF160Q9HCG1 818 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 C1orf109Q9NX04 203 aa17.56■□□□□ 0.4
MCF2L-214ENST00000423251 IGHV3-20A0A0C4DH32 117 aa17.55■□□□□ 0.4
MCF2L-214ENST00000423251 MKRN2OSH3BPM6 223 aa17.55■□□□□ 0.4
MCF2L-214ENST00000423251 KLF11O14901 512 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms