RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 OR2L2Q8NH16 312 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 COQ10AQ96MF6 247 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CENPOQ9BU64 300 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SP140LQ9H930 580 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TAS2R16Q9NYV7 291 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 EHD3Q9NZN3 535 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SLC13A4Q9UKG4 626 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 KLK4Q9Y5K2 254 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 VEGFDO43915 354 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KIAA0513O60268 411 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TNNI3P19429 210 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PSMA1P25786 263 aaKnown RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 GTF2E2P29084 291 aaKnown RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 XKP51811 444 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TARDBPQ13148 414 aaKnown RBP eCLIP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 INAVAQ3KP66 663 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KHDRBS2Q5VWX1 349 aaKnown RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PLAG1Q6DJT9 500 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PNCKQ6P2M8 343 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 C6orf120Q7Z4R8 191 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 DSG4Q86SJ6 1040 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KLHL6Q8WZ60 621 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SIGLEC11Q96RL6 698 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CCDC59Q9P031 241 aaKnown RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TAAR2Q9P1P5 351 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MKLN1Q9UL63 735 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 GPR34Q9UPC5 381 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KLHL20Q9Y2M5 609 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TSC22D4Q9Y3Q8 395 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MYL12BO14950 172 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 AQP9O43315 295 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ITGB7P26010 798 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PXNP49023 591 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CCR8P51685 355 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MPEG1Q2M385 716 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KLHL17Q6TDP4 642 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LCTLQ6UWM7 567 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 AKAP14Q86UN6 197 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NUDT13Q86X67 352 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LACC1Q8IV20 430 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KIAA1958Q8N8K9 716 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MRPL43Q8N983 215 aaKnown RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SLC38A5Q8WUX1 472 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KCNS3Q9BQ31 491 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SACM1LQ9NTJ5 587 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SAGE1Q9NXZ1 904 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MARK1Q9P0L2 795 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 C5AR2Q9P296 337 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ITGB1BP2Q9UKP3 347 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MGAT4BQ9UQ53 548 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OR1F1O43749 312 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SLC35G4P0C7Q5 338 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ADRB3P13945 408 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MAGEA8P43361 318 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PRKAG1P54619 331 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ELAVL3Q14576 367 aaKnown RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LEXMQ3ZCV2 418 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 STEAP3Q658P3 488 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LYSMD2Q8IV50 215 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 HORMAD2Q8N7B1 307 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SUSD6Q92537 303 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZSWIM3Q96MP5 696 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OSGEPL1Q9H4B0 414 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RNF167Q9H6Y7 350 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 DNAJC27Q9NZQ0 273 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SLC9A8Q9Y2E8 581 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 WBP11Q9Y2W2 641 aaKnown RBP11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 HCFC2Q9Y5Z7 792 aa11.14□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 EDDM13A0A1B0GTR0 161 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TMEM229AB2RXF0 380 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FAM227AF5H4B4 570 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 H7BY64 318 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OSMP13725 252 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CBLP22681 906 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FEN1P39748 380 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 GSTM5P46439 218 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CCT3P49368 545 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 HMGA2P52926 109 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 METAP1P53582 386 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CD300CQ08708 224 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 E2F2Q14209 437 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CACUL1Q86Y37 369 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MMAAQ8IVH4 418 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PARP16Q8N5Y8 322 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CELF5Q8N6W0 485 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ST13P5Q8NFI4 369 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PDXPQ96GD0 296 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PRAP1Q96NZ9 151 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OR5M11Q96RB7 305 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 BBS4Q96RK4 519 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RAD9AQ99638 391 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PSD2Q9BQI7 771 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CNPPD1Q9BV87 410 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FNDC11Q9BVV2 318 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PCBD2Q9H0N5 130 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RPL36Q9Y3U8 105 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TRBV4-1A0A0J9YWV2 114 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 C1QTNF3-AMACRE9PGA6 284 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms