RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 DSCR3O14972 297 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 FZD6O60353 706 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 TGM1P22735 817 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 EIF2DP41214 584 aaKnown RBP12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 IL18Q14116 193 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 MRPL58Q14197 206 aaKnown RBP12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 CRB2Q5IJ48 1285 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 ZFPM2Q8WW38 1151 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 COQ8BQ96D53 544 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 TMEM19Q96HH6 336 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 WACQ9BTA9 647 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 FNDC11Q9BVV2 318 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 RANGRFQ9HD47 186 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 ZNF226Q9NYT6 803 aa12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 NDRG4Q9ULP0 352 aaKnown RBP12.6□□□□□ -0.39
TNFRSF8-203ENST00000417814 CD8B2A6NJW9 211 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 GPX5O75715 221 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 CD8BP10966 210 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 CCR2P41597 374 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 MAN2A2P49641 1150 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 POLR2LP62875 67 aaKnown RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 ZNF791Q3KP31 576 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 LRRC70Q7Z2Q7 622 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 SLC30A2Q9BRI3 323 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 NECTIN3Q9NQS3 549 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 DYRK4Q9NR20 520 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 PLXNB2O15031 1838 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 A0A1W2PQ09 198 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 A0A1W2PS29 197 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 TBC1D3BA6NDS4 549 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 ZNF860A6NHJ4 632 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 ADRA2AP08913 450 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 MRPL3P09001 348 aaKnown RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 ALOX5P09917 674 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 CELP19835 753 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 HOXC8P31273 242 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 NRIP1P48552 1158 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 DSTNP60981 165 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 BAK1Q16611 211 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 FAM209AQ5JX71 171 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 SYT6Q5T7P8 510 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 TMEM150AQ86TG1 271 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 NLRP8Q86W28 1048 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 SLC30A8Q8IWU4 369 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 TMEFF1Q8IYR6 380 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 HORMAD2Q8N7B1 307 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 AMER3Q8N944 861 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 PJA1Q8NG27 643 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 EFHD2Q96C19 240 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 YIPF6Q96EC8 236 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 LRR1Q96L50 414 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 TSSK6Q9BXA6 273 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 C1QTNF3Q9BXJ4 246 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 EGLN3Q9H6Z9 239 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 OR1A2Q9Y585 309 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 CYP17A1P05093 508 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 CSF2RAP15509 400 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 ZNF8P17098 575 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 TIA1P31483 386 aaKnown RBP eCLIP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 SDC2P34741 201 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 SSR2P43308 183 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 GINS1Q14691 196 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 GRASPQ7Z6J2 395 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 ADGRD2Q7Z7M1 963 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.59□□□□□ -0.395e-6■■■■□ 21.5
TNFRSF8-203ENST00000417814 CCDC115Q96NT0 180 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 FCRL4Q96PJ5 515 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 GAL3ST1Q99999 423 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 MRPL9Q9BYD2 267 aaKnown RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 WSB2Q9NYS7 404 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 HCN4Q9Y3Q4 1203 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 GPSM3Q9Y4H4 160 aa12.59□□□□□ -0.39
TNFRSF8-203ENST00000417814 PSME4Q14997 1843 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 ZC3H12DA2A288 527 aaKnown RBP12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 CDK1P06493 297 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 PTPN6P29350 595 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 ZSWIM7Q19AV6 140 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 C9orf64Q5T6V5 341 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 KREMEN2Q8NCW0 462 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 ADAMTS19Q8TE59 1207 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 COQ7Q99807 217 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 MVB12BQ9H7P6 319 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 TAS2R9Q9NYW1 312 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 DNMT3BQ9UBC3 853 aaKnown RBP12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 CABIN1Q9Y6J0 2220 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 A0A1W2PQL4 384 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 PRAMEF25A6NGN4 478 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 HRO43593 1189 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 CCNYL3P0C7X3 344 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 ACP5P13686 325 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 GGT2P36268 569 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 SOX9P48436 509 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 GABARAPL2P60520 117 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 LRRC26Q2I0M4 334 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 ZNF517Q6ZMY9 492 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 VN1R5Q7Z5H4 357 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 GALNT12Q8IXK2 581 aa12.58□□□□□ -0.4
TNFRSF8-203ENST00000417814 IQCF2Q8IXL9 164 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms